Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01420 ATGGTCATGATCATGGATGTTTTCCAGCTTCAAACACTCATATCAGGCATTCTTGCCTTGTTAGTAGGTGCCTTGGTTTATCAGTTAAAGAAAACACATGGTCCTAATACAAAGATCTGCACTGTGCCACAGGCAGGAGGAGCATGGCCTATTGTTGGTCATTTGCCCCTCTTTGGGGCTAATCAACTAACACACAAAACGCTTGGTGCTATGGCTGACAAACATGGACCAATTTTCACAATAAAACTTGGTTCATATAAAGTTCTGGTGTTGAGTAGCTGGGAGATGGCCAAAGAGTGTTTCACTGTCCATGACAAAGCATTCTCCACCAGGCCCTGTGTTGCAGCCTCAAAGCTAATGACCTACAACACTGCAATGTTTGGCTTCGCTCCTCATGGACCCTACTGGCGTGAGATGAGGAAATTCACATCTGTTGAGCTTCTGTCTAACCAAAGGCTTGAACTTCTCAAGGACACAAGAGCATCTGAGTTAGAGGCTGCAACAAGGAGGGTTTACAAGTTGTGGGCAAGAGAAGGTTGTCCAAAGGGAGGGGTTTTGGTTGATATGAAGCAGTGGTTTGGGGATTTGACTCAAAATATCCTTCTGAGGATGGTGGGAGGGAAGCCATATTATGGGGCTAGTGATGATGATGGGGAAGGTGAAGCAAGGAGGTTTAAGAAAGCCATGAGGGACTTTATGAGTTTGTTTGGGGTGTTTGTTTTATCTGATGCAATTCCATTTCTGGGGTGGCTAGACAACAATGGATACAAAAAGGCAATGAAGAAAACAGCCAGTGAAATAGACACTTTGGTTGAAGGGTGGCTGGAGGAACACAAAAGAAAAAGAGCTGTGAGTAGAATTGGAAAGGAAGAACAGGATGTCATGGACGTCATGCTGAATGATCTGCAGAATCTTAAGGTTTCTGATTATGATACAGACACCATCATCAAGGCCACTTGTCTGAATCTAATTTTGGCAGGAGGAGACGCCGTCATGGTGGCTCTAATATGGACACTATCTCTGCTACTAAACAATAAAATGGAGCTTAAAAAAGCGCAAGATGAATTGGACACTCACGTTGGGAAGGACAGGAAGGTGGAAGAATCTGATACAAAGAAGTTGGTGTACCTGCAAGCCATTGTGAAGGAAACTATGCGCCTTTATCCACCAAGTCCTTTTATCACCCTTCGTGCAGCCATGGAAGAGTGCACCTTTTCATGCGGCTATCACATTCCTGCTGGCACACGTTTGATAGTGAATACTTGGAAGATCCAAAGAGATGGACGTGTTTGGAGTGATCCTCATGATTTCAAGCCTGAAAGGTTCTTGACACGGCACAAAGATGTTGATGTGAGAGGTCAGAACTATGAGTTACTCCCTTTTGGTTCAGGAAGGAGAGCATGCTCCGGTGCCTCATTGGCTCTACGTTTGGTGCACTTGACCTTGGCTAGACTCTTGCACTCTTTCAATGTTGCTTCTCCTTCAGATCAAGCTGTGGACATGACAGAGAGCATTGGACTCACAAATTTAAAAGCAACCCCACTTGATGTTCTTCTGACTCCACGTCTAGATACTAAGCTTTATGAGGACTAA 1593 0.4457 MVMIMDVFQLQTLISGILALLVGALVYQLKKTHGPNTKICTVPQAGGAWPIVGHLPLFGANQLTHKTLGAMADKHGPIFTIKLGSYKVLVLSSWEMAKECFTVHDKAFSTRPCVAASKLMTYNTAMFGFAPHGPYWREMRKFTSVELLSNQRLELLKDTRASELEAATRRVYKLWAREGCPKGGVLVDMKQWFGDLTQNILLRMVGGKPYYGASDDDGEGEARRFKKAMRDFMSLFGVFVLSDAIPFLGWLDNNGYKKAMKKTASEIDTLVEGWLEEHKRKRAVSRIGKEEQDVMDVMLNDLQNLKVSDYDTDTIIKATCLNLILAGGDAVMVALIWTLSLLLNNKMELKKAQDELDTHVGKDRKVEESDTKKLVYLQAIVKETMRLYPPSPFITLRAAMEECTFSCGYHIPAGTRLIVNTWKIQRDGRVWSDPHDFKPERFLTRHKDVDVRGQNYELLPFGSGRRACSGASLALRLVHLTLARLLHSFNVASPSDQAVDMTESIGLTNLKATPLDVLLTPRLDTKLYED 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01420 530 PANTHER CYTOCHROME P450 CYP82D47-LIKE 5 528 - -
Cca06g01420 530 SUPERFAMILY Cytochrome P450 48 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01420 530 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01420 530 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01420 530 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01420 530 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01420 530 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01420 530 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01420 530 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01420 530 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01420 530 Gene3D Cytochrome P450 38 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01420 530 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01420 530 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01420 530 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01420 530 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01420 530 Pfam Cytochrome P450 43 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01420 530 PANTHER CYTOCHROME P450 82C3-RELATED 5 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01420 Cca-Chr6 29062592 29065090 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01420 43 528 Cytochrome P450 AT4G31940 52.632 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01420 - - gmx:106794123 947.577