Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01419 ATGGCAATGGATGTTTTCCAACTCCAAGCTCTCATTTCCAGCATCATTGCGCTGTTAGTTGTGGTCTTCATTTATCGCTTAAAGAGAGTACCTAGTGGTAATACCAAGATCTGCACTGCACCTCAAGCTGGAAAAGCATGGCCAATTATTGGCCATTTACACCTCTTTGGGGCTCACCAATATACACACAAAACACTTGGGCTTATGGCTGAGAAACATGGTCCTATTTTCACTATAAAACTCGGTTCATACAAAGTTTTAGTATTGAGTAGTTGGGAGATGGCGAAGGAATGTTTTACTGTCCATGACAAAGCATTCTCCACCAGGCCTTGTGTTGCAGCCTCAAAGCTAATGGGCTACAACTATGCCATGTTTGGCTTCACTCCTTATGGCCCTTACTGGCGTGAGATGAGAAAATTAGCTACTATTGAGCTACTCTCTAATAACAGGCTTGAACTGCTGAAGAAAACAAGAACATCTGAGTTAGAAGCTGCAATAAGAGAGCTTCACAAATTTTGTTCAAGAGAAGGTTGTCCAGAGGGAGGGGTTTTGGTTGATATGAAGCAGTGGTTTGGGGACTTGACGCATAGTATTGTTCTCAGAATGGTGAGAGGGAAGCCACGCAGTGATGATTATGCAGAAGTTGAAGCAAGAAGGTACAAGAAAGTTATGAGGGACTTTATGAGTTTGTTTGGGGTGTTTGTTTTATCTGATGCTATTCCATTTCTGGGGTGGTGGGATATCAACGGATATGAAAAGGCCATGAAGAGAACTGCATGTGAATTGGACTCTCTTGTTGAAGGGTGGTTAGAGGAACACAAAAGAAGAAGAGCTTTGAGTGTGAATGGAAAGGAAGAACAGGATTTCATGGATGTCATGTTGAATGTTCTGCAGGATGCACACATTTCTGGCTATGATTCAGATACCATCATCAAGGCTACTTGCCTGAATCTGATTTTAGCAGGAAGTGACACCACCATGATTGCTCTAATTTGGGTGCTATCTCTGCTACTTAACCATCAAATGGAACTTAAAAAAGTCCAAGATGAATTGGACACTTATATTGGGAAGAATAGAAATGTGGAAGAATCTGACATAATGAATTTGGTGTACCTCCAAGCCATAGTCAAGGAAACACTGCGCCTGTATCCACCAAGTCCTATTATCACCCTTCGTGCAGCCATGGAAGATTGCACCTTCTCTTGTGGCTACCACGTTCCTGCTGGCACACATTTAATGGTGAATGCTTGGAAGATTCACCGAGATGGTCGTGTTTGGAGTGACCCTCATGAGTTCAAGCCTGAAAGGTTTTTGAAAAGCCACAAAGATGTTGATGTAAAGGGTAAGAACTATGAGCTAGTCCCTTTTGGTTCTGGAAGGAGAGCATGCCCTGGTGCCTCACTGGCTCTGCGTGTGGTGCACTTGACCTTGGCTAGACTCTTGCACTCTTTCAATGTTGCTTCTCCTTCAAATCAAGTTGTGGACATGACAGAGAGCATTGGTCTCACAAATTTAAAAGAAACCCCCCTTCAAGTTCTCCTAACTCCACGTCTAGACACTAGGCTTTATGAGGACTAG 1578 0.4316 MAMDVFQLQALISSIIALLVVVFIYRLKRVPSGNTKICTAPQAGKAWPIIGHLHLFGAHQYTHKTLGLMAEKHGPIFTIKLGSYKVLVLSSWEMAKECFTVHDKAFSTRPCVAASKLMGYNYAMFGFTPYGPYWREMRKLATIELLSNNRLELLKKTRTSELEAAIRELHKFCSREGCPEGGVLVDMKQWFGDLTHSIVLRMVRGKPRSDDYAEVEARRYKKVMRDFMSLFGVFVLSDAIPFLGWWDINGYEKAMKRTACELDSLVEGWLEEHKRRRALSVNGKEEQDFMDVMLNVLQDAHISGYDSDTIIKATCLNLILAGSDTTMIALIWVLSLLLNHQMELKKVQDELDTYIGKNRNVEESDIMNLVYLQAIVKETLRLYPPSPIITLRAAMEDCTFSCGYHVPAGTHLMVNAWKIHRDGRVWSDPHEFKPERFLKSHKDVDVKGKNYELVPFGSGRRACPGASLALRVVHLTLARLLHSFNVASPSNQVVDMTESIGLTNLKETPLQVLLTPRLDTRLYED 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01419 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Cca06g01419 525 Gene3D Cytochrome P450 36 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01419 525 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01419 525 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01419 525 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01419 525 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01419 525 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01419 525 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01419 525 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01419 525 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01419 525 Pfam Cytochrome P450 41 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01419 525 PANTHER CYTOCHROME P450 CYP82D47-LIKE 3 523 - -
Cca06g01419 525 PANTHER CYTOCHROME P450 82C3-RELATED 3 523 - -
Cca06g01419 525 SUPERFAMILY Cytochrome P450 45 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01419 525 Coils Coil 344 364 - -
Cca06g01419 525 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01419 525 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01419 525 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01419 525 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01419 Cca-Chr6 29056443 29058832 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01419 10 523 Cytochrome P450 AT4G31940 49.809 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01419 - - gmx:606549 917.146