Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01380 ATGAAAAGAATGGATTGGCGCGCCGAGCCGTGGGATTCCTCTGTTGTGTGGGGAGTGGGGACCACATTCTCGTGTTACAGGCTTACAGCCACACCACACCCATGCACTCCTCTCGACACGTCAAACGTGGTCCCCCCCCACGCTTTTCCTTTTTTTATTATGGGTTTCTGTGTCGCACGTGTGGAGCCGACTCCCTGGGCCCCACCCACTCTCATTTCCTCCTTTGTCCTCGTCGCCGCAGAATTGGACTGTGGTACCCGTGATTTCGCTACAGCACTACCCTGGAACGATGACCGGCGGCGGGTCTACGGGGAGGATGCCGACGTGGAAGGAGAGAGAGAACAACAAGCGGAGAGAGAGAAGACGGCGAGCGATCGCGGCCAAGATCTACGCGGGGCTCCGCGCTCAGGGGAACTACAAGCTTCCGAAACACTGCGACAACAACGAAGTCCTGAAAGCGCTGTGCAACGAAGCTGGGTGGATGGTGGAAGAAGACGGGACGACGTATCGCAAGGGGTGCAAGAGACCTGCAAGCGGAAGCGAGATAGGAGGCGCTATGGATTCATCGATTCAGGCGAGTCCACAATCGTCTTCATTCCCAAGCCCAGTACCCTCGTACCAGGCGAGCCCAACCTCTTCCTCCTTCCCAAGCCCAACACGATATCCAACAGCGCCCCCGTCACTCCCCCTCTTTCCTCGCCGCGAGCCTCCAAGCGCAAGGCCAACTTCCACCCCCTCTTCGccacctccgccccctccagccccacgcgccgccaccacctcgccacctccaccaTCCCCGAGTGCGACGAGTCCGACGCCTCCACCGTCGACTCCGCCTCCGGCCGCTGGATCGGGTCCCAGGACGTGAACGATGGCATGCAGATGCAGTGGGAGCGAGGGTCCGATTTCGACTTCGAGAACGGAAGAGTGAAGCCGTGGGAGGGTGAGAGAATACACGAGGTCGGAATGGATGACTTGGAGCTTACTCTCGGCGTCGGAAAGCCCTGA 1011 0.5608 MKRMDWRAEPWDSSVVWGVGTTFSCYRLTATPHPCTPLDTSNVVPPHAFPFFIMGFCVARVEPTPWAPPTLISSFVLVAAELDCGTRDFATALPWNDDRRRVYGEDADVEGEREQQAEREKTASDRGQDLRGAPRSGELQASETLRQQRSPESAVQRSWVDGGRRRDDVSQGVQETCKRKRDRRRYGFIDSGESTIVFIPKPSTLVPGEPNLFLLPKPNTISNSAPVTPPLSSPRASKRKANFHPLFATSAPSSPTRRHHLATSTIPECDESDASTVDSASGRWIGSQDVNDGMQMQWERGSDFDFENGRVKPWEGERIHEVGMDDLELTLGVGKP 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01380 336 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 196 335 IPR033264 GO:0003700|GO:0006351|GO:0009742
Cca06g01380 336 MobiDBLite consensus disorder prediction 106 132 - -
Cca06g01380 336 MobiDBLite consensus disorder prediction 106 180 - -
Cca06g01380 336 MobiDBLite consensus disorder prediction 140 155 - -
Cca06g01380 336 PANTHER BES1/BZR1 HOMOLOG PROTEIN 1 196 335 - -
Cca06g01380 336 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Cca06g01380 336 MobiDBLite consensus disorder prediction 159 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01380 Cca-Chr6 28685510 28688772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01380 221 335 BZR Transcription Factor Family AT1G75080 43.373 3.50e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01380 K14503 - gmx:100812095 190.274