Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01359 ATGAAACAAGCAGCTTCAAAGTCATCCCTGAGGAGGCTTTGTCCGAACATCGATAAAGAAGATGGATTGGAGACCGTTCTCGAAATACCTATACCCGAAGAAATGTTCGCAAACATGGGAAACAACGTGACGGTGCGGTGGCAAAACATGTTAACGTGGATGAAGGCCCAAACGGAGGACAAATTGGCAACCCCCACAGTTGCATCACGCTTGAACGAGCTTCGCTTTCTGCTTTACCTCGTTGGATCCCCTCTTATCCCTCTTCAGGTCCAGTTAGGCCATTCCGTCCATCGTCCCGTCAGAGATTGTTCCATTGAAGCATCAACAGCAAAGTATATAGTGCAACAATACATAGCGGCGACGGGAGGACAGCCAGCATTGAATGCGGTGGACAGTATGTGTGTGACTGGACAGGTGAAGATTACTGCGTCAGATTTTCACCACACGAATGAAAGCATAGAGGTGAAGAAAACCTCAGAAGAGATGGGAGGGTTTGTTTTGTGGCAAAAGGACCCTGATTTGTGGTGCTTAGAGATCATTTTGTCCGGTTGCAAGGTTTGTTGCGGTAGCAATGGCAAGGTCTCCTGGCGCCTTTCTTCTAACCAACAAACCCAGGCTGCAAAAGGTGCTCCTAGACCTTTGCGCCGTTTCCTTCAGGGATTGGATCCAAGGGCCACGGCTAACTTATTTTTGGACGCTGCATGCATAGGAGAGAAAATAATCAATGATGAGGAATGCTTCATATTGAAACTGGAAACAAGTCCAGCAATTCGTGATGCCCAAAGTGGTCCAAACTTTGAGATTATCCACCACACTATATGGGGCTATTTCAGCCAGCGATCTGGTCTCTTGGTTCAATTTGAAGACTCTAGATTACTCACAATGAGAACCAAAGATGACAATGACATTTTTTGGGAAACAAGTTTAGAATCAGTAATTGAGGATTATAAGTACGTAGATGGGATAAATGTGTCACACAGTGGTAAGACTCGAGTGACAGTGTCGAGATATGGCGAACAATCAGCTAACCATAAAAGAGAATtggaagagagatggaagatcgaagaggtagatTTCAATATATGGGGTTTGAATGCTGAAAGCTTTTTACCTCCCTCAGGCTTAGGAAAGACATGA 1137 0.4389 MKQAASKSSLRRLCPNIDKEDGLETVLEIPIPEEMFANMGNNVTVRWQNMLTWMKAQTEDKLATPTVASRLNELRFLLYLVGSPLIPLQVQLGHSVHRPVRDCSIEASTAKYIVQQYIAATGGQPALNAVDSMCVTGQVKITASDFHHTNESIEVKKTSEEMGGFVLWQKDPDLWCLEIILSGCKVCCGSNGKVSWRLSSNQQTQAAKGAPRPLRRFLQGLDPRATANLFLDAACIGEKIINDEECFILKLETSPAIRDAQSGPNFEIIHHTIWGYFSQRSGLLVQFEDSRLLTMRTKDDNDIFWETSLESVIEDYKYVDGINVSHSGKTRVTVSRYGEQSANHKRELEERWKIEEVDFNIWGLNAESFLPPSGLGKT 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01359 378 Pfam Protein of unknown function (DUF620) 133 372 IPR006873 -
Cca06g01359 378 PANTHER BNAC02G43970D PROTEIN 10 368 - -
Cca06g01359 378 PANTHER LIPASE 10 368 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01359 Cca-Chr6 28440582 28442912 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01359 - - gmx:102664990 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01359 06 28440582 28442912 Cca06g01359 06 28440582 28442912 ECH
Cca04g00431 04 4267499 4271962 Cca06g01359 06 28440582 28442912 ECH