Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01298 ATGGAATGGATTATGGGTGTGTGTGTTCTGATTGGCATCTTGTTCATGAGTTGGTGGTTTGTATGGAACAAGAAGAATGATGTGGCAAAGGGCAAAATTCCGAAAGGAAACTCGGGTTGGCCTTTACTCGGAGAGACCCTTGATTACATTGCTTCTGGCTACTCTTCAAACCCTGTTAGCTTCTTGGAAAAACGCAAATCTTTATACGGAAATGTGTTTAAGACACGAATTTTGGGAAGCAATTTGATAGTGTCGACGGAGCCAGAAGTGAACAAGGTGATTCTGCAGAACCAGGCGAACTTCATCCCCGCTTATCCAAAGTCAATTAGAGAATTAATGGGAGAACAATCCATACTCAAAATGAACTCCACCACGCACAAGAAAGTGCACACACTCATCGCAGGCTTCCTCCGATCCCCACAATGCAAAGCTCGAATCACCAAAGACATTGAACTCACTGTCAAACAATGCCTCGCTTCTTGGACCCACCAAATACAACCTATATATGTTCAAGATCAAGTCAAAAAGATTACGTTTCCTGTTTTGGTCAAAGTTCTCATGAGCGTTGGTCCTGGTGAAGATTTGGATTTCCTCTATAGAGAGTTTGCACAATTCATCAAAGGCTTGATTTGCATACCCCTCAAATTTCCCGGAACAACACTATATAAATCCTTGAAGGCTAAAGAACGGATGGTGAAGATGGTGAGGAAGATAGTAGAGGAGAGGAAGAAGGTAGTCACGGATAACAATGGTGATGTAGCAGTGAATGATGTGGTGGACGTTCTATTACGGGATAAGGGTGAGGCAAACTCAAGCTCACGTTTGAGTCCAGAAATGATTAGCCAAAACATCATAGAGATGATGATACCAGGGGAGGAGACTCTCCCTACGGCTATGACCACCGTCATCAAGTTCCTCACTGATTCCCCTCTCGCTCTATACAGACTTCAGGAGGAGAACATGGAACTGAAGAAGCTGAAGGCTAATTCCTCAGATGATTATACATGGAGTGATTACATGTCACTGCCATTTACTCAAAATGTCATTAGTGAAACTCTTAGAATGGCCAATATTGTGAATGGCATTTGGAGGAAATCGGTCCAAGACATAGAAATCAAAGGGTACCTAATTCCGAAGGATTGGGGTATTATGGCATCTCTTACTTCTGTTCACATGGACAACAAGAACTATGAAAACCCTTATAACTTCAATCCATGGAGATGGGAGAAAATTGGAGTTGTGGCTAGTAACAACCACTATGCCCCATTTGGCGGTGGACCTAGACTGTGCCCTGGATTAGAACTCTCTAGGCTAGAGCTCGCTATTTTCCTTCACCATCTTGTTACTACTTACAGTTGGGTCGCTGAGAAGGATGAAATAGTCTACTTTCCAACAGTCAAGATGAAGAGAAAGCTTCCAATTAGTGTTCAACCCCTTAACGCTTGA 1446 0.4295 MEWIMGVCVLIGILFMSWWFVWNKKNDVAKGKIPKGNSGWPLLGETLDYIASGYSSNPVSFLEKRKSLYGNVFKTRILGSNLIVSTEPEVNKVILQNQANFIPAYPKSIRELMGEQSILKMNSTTHKKVHTLIAGFLRSPQCKARITKDIELTVKQCLASWTHQIQPIYVQDQVKKITFPVLVKVLMSVGPGEDLDFLYREFAQFIKGLICIPLKFPGTTLYKSLKAKERMVKMVRKIVEERKKVVTDNNGDVAVNDVVDVLLRDKGEANSSSRLSPEMISQNIIEMMIPGEETLPTAMTTVIKFLTDSPLALYRLQEENMELKKLKANSSDDYTWSDYMSLPFTQNVISETLRMANIVNGIWRKSVQDIEIKGYLIPKDWGIMASLTSVHMDNKNYENPYNFNPWRWEKIGVVASNNHYAPFGGGPRLCPGLELSRLELAIFLHHLVTTYSWVAEKDEIVYFPTVKMKRKLPISVQPLNA 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01298 481 SUPERFAMILY Cytochrome P450 31 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01298 481 Gene3D Cytochrome P450 23 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01298 481 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90C1 5 476 - -
Cca06g01298 481 Pfam Cytochrome P450 34 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01298 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506|GO:0016705
Cca06g01298 481 PRINTS E-class P450 group IV signature 60 83 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01298 481 PRINTS E-class P450 group IV signature 342 358 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01298 481 PRINTS E-class P450 group IV signature 391 409 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01298 481 PRINTS E-class P450 group IV signature 414 430 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01298 481 PRINTS E-class P450 group IV signature 430 448 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01298 481 PANTHER CYTOCHROME P450 26 5 476 - -
Cca06g01298 481 PRINTS P450 superfamily signature 138 151 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01298 481 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01298 481 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01298 481 PRINTS P450 superfamily signature 430 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01298 Cca-Chr6 27728378 27735079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01298 32 451 Cytochrome P450 AT3G13730 49.526 3.16e-154 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01298 K12637 - gmx:100799030 791.956