Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01264 ATGATCTCCTCCCTCTCCTTTCCAGCGTCTCTCCCCGCCAACACCGTCGTTTCGCCGCCCTACCAACCGAGGCCTTCGTATCTCAACTCCTCTTGCTCCTCTCTCTACGACATCCTCGGCATCCCCGCCGCCGCCTCCAACCAGGAAATCAAGGCGGCGTACCGGCGCTTGGCCAGAGCCTGCCACCCGGACGTGGCGGCGATCGACCGGAAAAACTCCTCGGCCGACGAGTTCATGAAGATCCACGCCGCCTACTCCACCCTCTCCGATCCCGACAAGCGCGCAAATTACGACCGGAGCCTCTTCCGGCGACAACGGCCGTTGTCGAAGGCGGCGGCGTTTTCCGGTTACACGAGTCGGAACTGGGAAACGGATCAGTGCTGGTAG 387 0.6253 MISSLSFPASLPANTVVSPPYQPRPSYLNSSCSSLYDILGIPAAASNQEIKAAYRRLARACHPDVAAIDRKNSSADEFMKIHAAYSTLSDPDKRANYDRSLFRRQRPLSKAAAFSGYTSRNWETDQCW 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01264 128 CDD DnaJ 36 90 IPR001623 -
Cca06g01264 128 PRINTS DnaJ domain signature 36 54 IPR001623 -
Cca06g01264 128 PRINTS DnaJ domain signature 54 69 IPR001623 -
Cca06g01264 128 PRINTS DnaJ domain signature 73 93 IPR001623 -
Cca06g01264 128 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 20 128 - -
Cca06g01264 128 PANTHER - 20 128 - -
Cca06g01264 128 ProSitePatterns Nt-dnaJ domain signature. 78 97 IPR018253 -
Cca06g01264 128 Pfam DnaJ domain 35 98 IPR001623 -
Cca06g01264 128 Gene3D DnaJ domain 25 121 IPR036869 -
Cca06g01264 128 ProSiteProfiles dnaJ domain profile. 34 101 IPR001623 -
Cca06g01264 128 SMART dnaj_3 33 93 IPR001623 -
Cca06g01264 128 SUPERFAMILY Chaperone J-domain 31 104 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01264 Cca-Chr6 27135977 27136622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01264 36 98 C2H2 Transcription Factor Family AT1G74250 41.791 1.61e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01264 - - ccaj:109804908 223.787