Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01255 ATGGCTGTTCCTGTGGCCCTGTTACCTCGTTGGTCGCTGTTTCTTTTTCTCTTTGTCTTGTGTAGCTCAGGAGCAAAGGTTGTCACTGTTGATGTACATGCAGCCAAGAGTCTCATCCAAACTGGCTCCATTTATCTTGATGTTAGGACGGTGGAAGAGTTCCTGAAAGGGCATGTGGCTGCGGCTAATATCGTTAACGTTCCATACATGTTGAATACACCCAAGGGCAAGGTAAAGAATCCAGACTTTCTGAAGGAGGTTTCATCGGCTTGTAACAAAGAAGATCATCTCATTGTGGGTTGTCAAAGTGGGGTGAGATCTCTGTATGCAACTACTGATCTTCTGTCTCATGGTTTTAAGAATGTGAACGACATGGGAGGAGGGTATGTGGACTGGATTAAAAACAAGTTTCCAGTGAATATACCACTAGCCAAGGAGGAGCTATAA 447 0.4452 MAVPVALLPRWSLFLFLFVLCSSGAKVVTVDVHAAKSLIQTGSIYLDVRTVEEFLKGHVAAANIVNVPYMLNTPKGKVKNPDFLKEVSSACNKEDHLIVGCQSGVRSLYATTDLLSHGFKNVNDMGGGYVDWIKNKFPVNIPLAKEEL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01255 148 CDD RHOD 35 132 - -
Cca06g01255 148 Pfam Rhodanese-like domain 35 134 IPR001763 -
Cca06g01255 148 PANTHER THIOSULFATE SULFURTRANSFERASE 18 12 147 IPR044684 GO:0003824
Cca06g01255 148 Gene3D - 19 140 IPR036873 -
Cca06g01255 148 ProSiteProfiles Rhodanese domain profile. 44 141 IPR001763 -
Cca06g01255 148 SMART rhod_4 30 138 IPR001763 -
Cca06g01255 148 PANTHER THIOSULFATE SULFURTRANSFERASE 18 12 147 - -
Cca06g01255 148 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 26 139 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01255 Cca-Chr6 27029276 27030702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01255 26 140 Sulfurtransferasese or Rhodanese AT5G66170 58.261 3.12e-49 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01255 - K15692 gmx:100815122 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01255 06 27029276 27030702 Cca06g01255 06 27029276 27030702 ECH