Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01248 ATGGAGAAAAGTCGAATCGATGAGGAGTATCTGAAGGAAATAGAGAAGGCAAGACGTGAACTTCGGGCTCTCATCTACAAGGAAAAATGCGCCCCTCACATGCTTCGCTTAGCATGGCAAGATGCTTGTAGCTACGATCCTGAGAGCAAAATAAGAGGAGGCCCTAACGGTTGCATAAGGAGTGAACAAGTGTTGAAACGCCAAGAAAACAAGGGCTTGGACAAAGCACTTCAATTATGTGAGCAAGTCAAGGCCAAACTTAAAAAAGTTTCATACGCCGACCTTTACCAGCTAGCTGGTGTCGTTGCAGTAGAGGTCACTGGGGGTCCATCTATTCGATTTGTACCTGGCAGAGAGGATTCAGACGAGCCTCCACAAGAAGGACGCATTCCAAATCCCCACGAAAGAGGTGTATCACATTTAAGGGATATTTTTACTACTCGGATGGGTCTAACTGATCAAGACATTGTAGCTCTATTTGGGGGCCAAGTTTTGGTAAGAACCATATATCCAATTAATAATAAGGGAGAGACATCTGAAAATCAGTCTAGCATAAAAGGAAAAACAGATGAGGCAACCGAAGATCACTCTAGAAAAATAGGAAAAACGAGTGAGACTTCTGAAAATCATTCTAGCAAAACAGAAAAATTGAGTGAGACATCCAAAGATGACTTTGGCAAAATAGAAAAATCAAGTGAGGCATCTAAAGATCACAATGACAAAAAAGGAATATGGACATCGAATCCATTGAAGTTCGATAACTCCTATTTTGTGGAATTATTGAAAAATGATAAATTTACACTTAACATGGACAAAGCTCTGGTGGAAGATAGAAAGTTTCGAAAGTATGTTGAAAAGTATGCAAAGGATAAGGATGCTTTTCTCAAAGATTACGAAGTTGCACATAAGAAACTCTCTGAGCTAGGCTTCTCGAGTCCTTTCATGTTTCCTAAGGTGCCACCTGAGAAGCTCGAGCAAATTAAGCCAAAGGCCAAGCGAGTTCTTGGAATCCTTATGGTCTCAGTTGCAATATTAGGTTATTTACGAAAGAGAAAAAGTAACCAACTTAAGACATAA 1077 0.403 MEKSRIDEEYLKEIEKARRELRALIYKEKCAPHMLRLAWQDACSYDPESKIRGGPNGCIRSEQVLKRQENKGLDKALQLCEQVKAKLKKVSYADLYQLAGVVAVEVTGGPSIRFVPGREDSDEPPQEGRIPNPHERGVSHLRDIFTTRMGLTDQDIVALFGGQVLVRTIYPINNKGETSENQSSIKGKTDEATEDHSRKIGKTSETSENHSSKTEKLSETSKDDFGKIEKSSEASKDHNDKKGIWTSNPLKFDNSYFVELLKNDKFTLNMDKALVEDRKFRKYVEKYAKDKDAFLKDYEVAHKKLSELGFSSPFMFPKVPPEKLEQIKPKAKRVLGILMVSVAILGYLRKRKSNQLKT 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01248 358 MobiDBLite consensus disorder prediction 175 240 - -
Cca06g01248 358 Gene3D Peroxidase, domain 2 136 301 - -
Cca06g01248 358 ProSiteProfiles Plant heme peroxidase family profile. 31 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01248 358 MobiDBLite consensus disorder prediction 187 240 - -
Cca06g01248 358 PRINTS Haem peroxidase superfamily signature 31 45 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01248 358 PRINTS Haem peroxidase superfamily signature 90 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01248 358 PRINTS Haem peroxidase superfamily signature 108 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01248 358 PRINTS Haem peroxidase superfamily signature 155 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01248 358 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01248 358 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 232 350 - -
Cca06g01248 358 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 4 168 - -
Cca06g01248 358 SUPERFAMILY Heme-dependent peroxidases 9 315 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca06g01248 358 Pfam Peroxidase 18 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01248 358 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 4 168 IPR044831 GO:0004601|GO:0034599
Cca06g01248 358 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 232 350 IPR044831 GO:0004601|GO:0034599
Cca06g01248 358 PRINTS Plant ascorbate peroxidase signature 10 30 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01248 358 PRINTS Plant ascorbate peroxidase signature 31 46 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01248 358 PRINTS Plant ascorbate peroxidase signature 64 88 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01248 358 PRINTS Plant ascorbate peroxidase signature 89 107 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01248 358 PRINTS Plant ascorbate peroxidase signature 108 120 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01248 358 PRINTS Plant ascorbate peroxidase signature 149 170 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01248 358 MobiDBLite consensus disorder prediction 113 139 - -
Cca06g01248 358 MobiDBLite consensus disorder prediction 116 139 - -
Cca06g01248 358 Gene3D - 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01248 Cca-Chr6 26954246 26957201 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01248 59 306 Peroxidase AT3G17070 26.255 5.99e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01248 K00434 - gmx:100806101 248.825