Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01247 ATGGCCCTAGTTGACGAGGAGTATCTGGAAGAAATAGAGAAGGCTCGACGCCAACTTCGCCTTCTCATCACCATCAACAAGTGCGCCCCTCTCATGCTTCGCTTAGCGTGGAACGATGCTTGTACCTACGATGCCCAAACCCGAACAGGAGGTGCCAACGCTTCTATTAGGACCCCACAAGAGTTGAAACACCAGGCAAACATCGGATTGGAACGAGCAGTTCGATTATGTGAGGAAGTCAAGGCCAAACTTAAAAAAGTTTCTTACGCCGATCTTTACCAGCTTGCTGGTGTGGTTGCAATTGAGCTCACCGGGGGTCCAACTATTAACTTTTATCCCGGTAGACAGGATTCGGATGAGTGTCCACCAGAAGGCCGCCATCTAAGTGGCGAAGAAGATGCAAAGAGTTTAAGGAATACCTTTTCTCGTATGGGTCTAAGGGACGATAAACATATTGTGGCTCTATGTGGAGGCGTAAGAACGATATCATATACCAAGGGTCCTTATGGTCAATGGACAAAGGACCCTTTGAAGTTTGATAACTCCTATTTTGTGGAACTATTGAGTAAGGATGCATCATCAAGGCTTCCCATGGACGATGCTTTAGTAAAGGATGAAAAATTTCGTCACTTTGTTGAACTATATGCAAAGGATGAGGATACGTTTTTCAAAGATTATGCAATGTCACATGAGAAGCTCTCTGAGCTAGGTTGCAATCTGAAGAAGCCAAATCAGCCAAAGGGATCATTTGAGAAGCTAAATCAGCCCAAGGGACTTATAGGAATCGGTTTAGTATCACTTGTGGTGACCGTGATATTAGGTTACTTAATGAAGAAGCGGAAGAAAAACCAATTAAAGTTGGAAAACAATTTAAAGCGTTGGCTGAGAAAAGTAATGGAGAAAACTCCAGTTGATGATGAGTACCTGAAGGAAATTGATAAGGCTAGACGTGAACTTCGGGCTCTTATCTACAACGAAAGATGTGCTTCTCTCATGCTTCGATTAGCGTGGCAAGATGCTTGTACCTACGATCCCGAGAGCAAAATAAAAGGAGGTCCGAACGGTTCTATCAAGAGTGATCAAGAGTTGGGTCGCCAGGAAAACGGGGGATTGAGCAAAGCAGTTAAATTATGTGAGGAAGTGAAGGCCAAACTTAAGAAAGTCTCGTACGCTGACCTTTATCAGCTAGCTGGTGTTGTTGCAGTAGAGGTCACTGGGGGTCCCACTATTCACTTTCTTCCCGGTAGAGAGGATTCACTTGAGCCTCCACAGGAAGGACGCCATCCACATCCCGAAGAAAAAAGTGCATCGCATTTAAGAGATATCTTTACTACTCGTATGGGTCTAACTGATCAAGACATTGTAGCTTTATTTGGGAGCCACACTTTGGGCAAGGATGATCATTTTGGCAAAGGAAAATGGATAGGAAATCTTAAGAAGTTTGATAACTCCTATTTCGTGGAATTATTGAAAAAGGATGCATCCTTGTTAAAGGTTTTTCCCGCAGACATTGCCCTGGTAGAAGATAAAAAGTTCCGCAATTATGTTGAAATGTATGCCAAGGATGAGGATGTTTTTTTCAAAGATTATGCAGCTGCACATAAGAAATTCTGTGAGCTAGGCTGCAATCTTGATACTTCCATTATTCCGAAGGTGCCACCTGAGAAGTTAAAGCTAATTATGCCGAAGGTCAAGGGAGTTATAGGAATTGTTATAGTCTCAACTGCGACATTAGGCTACTTACGAAGGAGAAAAAATAATCAACTGAAGAAATAA 1776 0.4285 MALVDEEYLEEIEKARRQLRLLITINKCAPLMLRLAWNDACTYDAQTRTGGANASIRTPQELKHQANIGLERAVRLCEEVKAKLKKVSYADLYQLAGVVAIELTGGPTINFYPGRQDSDECPPEGRHLSGEEDAKSLRNTFSRMGLRDDKHIVALCGGVRTISYTKGPYGQWTKDPLKFDNSYFVELLSKDASSRLPMDDALVKDEKFRHFVELYAKDEDTFFKDYAMSHEKLSELGCNLKKPNQPKGSFEKLNQPKGLIGIGLVSLVVTVILGYLMKKRKKNQLKLENNLKRWLRKVMEKTPVDDEYLKEIDKARRELRALIYNERCASLMLRLAWQDACTYDPESKIKGGPNGSIKSDQELGRQENGGLSKAVKLCEEVKAKLKKVSYADLYQLAGVVAVEVTGGPTIHFLPGREDSLEPPQEGRHPHPEEKSASHLRDIFTTRMGLTDQDIVALFGSHTLGKDDHFGKGKWIGNLKKFDNSYFVELLKKDASLLKVFPADIALVEDKKFRNYVEMYAKDEDVFFKDYAAAHKKFCELGCNLDTSIIPKVPPEKLKLIMPKVKGVIGIVIVSTATLGYLRRRKNNQLKK 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01247 591 MobiDBLite consensus disorder prediction 413 436 - -
Cca06g01247 591 SUPERFAMILY Heme-dependent peroxidases 26 240 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 Gene3D - 315 541 - -
Cca06g01247 591 Gene3D Peroxidase, domain 2 128 230 - -
Cca06g01247 591 Gene3D Peroxidase, domain 2 429 534 - -
Cca06g01247 591 Gene3D - 15 237 - -
Cca06g01247 591 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 3 280 - -
Cca06g01247 591 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 301 580 IPR044831 GO:0004601|GO:0034599
Cca06g01247 591 PRINTS Haem peroxidase superfamily signature 406 418 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 PRINTS Haem peroxidase superfamily signature 453 468 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 PRINTS Haem peroxidase superfamily signature 474 489 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 PRINTS Haem peroxidase superfamily signature 329 343 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 PRINTS Haem peroxidase superfamily signature 388 405 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 Pfam Peroxidase 26 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 Pfam Peroxidase 316 522 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 PRINTS Plant ascorbate peroxidase signature 105 117 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 PRINTS Plant ascorbate peroxidase signature 61 85 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 PRINTS Plant ascorbate peroxidase signature 214 238 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 PRINTS Plant ascorbate peroxidase signature 86 104 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 PRINTS Plant ascorbate peroxidase signature 47 57 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 PRINTS Plant ascorbate peroxidase signature 8 28 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 PRINTS Plant ascorbate peroxidase signature 164 188 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 PRINTS Plant ascorbate peroxidase signature 29 44 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 ProSiteProfiles Plant heme peroxidase family profile. 325 584 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 3 280 IPR044831 GO:0004601|GO:0034599
Cca06g01247 591 SUPERFAMILY Heme-dependent peroxidases 306 546 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 ProSiteProfiles Plant heme peroxidase family profile. 29 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01247 591 MobiDBLite consensus disorder prediction 418 436 - -
Cca06g01247 591 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 301 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01247 Cca-Chr6 26942883 26949605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01247 315 540 Peroxidase AT2G22420 27.240 1.06e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01247 K00434 - gmx:100813526 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01247 06 26942883 26949605 Cca06g01247 06 26942883 26949605 ECH