Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01246 ATGGTAAAGGCTACAGTTGGTGGTGAATATCTGAAGGAATTTGAGAAGGCTCGTCGTGACCTTCGTGCTCTTATCTCCAACAGAAACTGCGCCCCTCTCATGCTACGATTAGCGTGGCATGATGCTGGTACCTACGATGCTAAAACAAAAACAGGAGGTCCCAATGGCTCTATCAGGACAGAAGAAGAGTTGAATCACGCAGCAAACAAGGGGCTGAGAACAGCAGTTGAGTTCTGTGAGGAGGTGAAGGCCAAACATCCAAAAGTTTCATATGCTGACATTTACCAGCTTGCTGGTGTTGTTGCAGTAGAGGTTACTGGGGGTCCAACTATTGATTTTCTTCCCGGGAGAAAGGATTCATTGGAATCTCCAGCAGAAGGGCGTCTTCCAGATGCCAAACAAGGTGCATCTCATTTAAGAGAGATCTTTTATCGCATGGGTCTTGGCGACAGAGACATTGTGGCTCTATCCGGAGGCCACACTTTGGGTAAGGCACATAAAGATCGTTCTGACTTTCATGGTCAATGGACAAAGGACCCTTTGAAGTTTGATAATTCCTATTTTGTGGAATTACTGAAAGGGGACTCAAAAGATTTATTGAAGCTTCCCACAGACAAGGCTTTAGTTGAGGATCTTAAGTTCCGCAAGTATGTTGAACTGTATGCCAAGGATGAGGATGCTTTTTTCGCAGATTATGCAAGCTCACACAAAAAACTCTCAGAGCTGGGCTTCAATGTCAAGGATCGTTCCATGTTGGTGAAGGGTGCTATAGGAATTGCCATTGCCTTAACTGCTGTTATCTTGGGTTACTTACGTGAGCTGAACATTAATAAAACCAGTTGA 843 0.446 MVKATVGGEYLKEFEKARRDLRALISNRNCAPLMLRLAWHDAGTYDAKTKTGGPNGSIRTEEELNHAANKGLRTAVEFCEEVKAKHPKVSYADIYQLAGVVAVEVTGGPTIDFLPGRKDSLESPAEGRLPDAKQGASHLREIFYRMGLGDRDIVALSGGHTLGKAHKDRSDFHGQWTKDPLKFDNSYFVELLKGDSKDLLKLPTDKALVEDLKFRKYVELYAKDEDAFFADYASSHKKLSELGFNVKDRSMLVKGAIGIAIALTAVILGYLRELNINKTS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01246 280 Gene3D Peroxidase, domain 2 130 236 - -
Cca06g01246 280 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 4 273 IPR044831 GO:0004601|GO:0034599
Cca06g01246 280 SUPERFAMILY Heme-dependent peroxidases 11 248 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca06g01246 280 ProSitePatterns Peroxidases active site signature. 31 42 IPR019794 GO:0004601
Cca06g01246 280 Gene3D - 17 243 - -
Cca06g01246 280 Pfam Peroxidase 18 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01246 280 PRINTS Haem peroxidase superfamily signature 31 45 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01246 280 PRINTS Haem peroxidase superfamily signature 89 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01246 280 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01246 280 PRINTS Haem peroxidase superfamily signature 152 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01246 280 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01246 280 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 4 273 - -
Cca06g01246 280 ProSitePatterns Peroxidases proximal heme-ligand signature. 152 162 IPR019793 -
Cca06g01246 280 CDD ascorbate_peroxidase 9 245 - -
Cca06g01246 280 PRINTS Plant ascorbate peroxidase signature 10 30 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01246 280 PRINTS Plant ascorbate peroxidase signature 31 46 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01246 280 PRINTS Plant ascorbate peroxidase signature 49 59 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01246 280 PRINTS Plant ascorbate peroxidase signature 63 87 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01246 280 PRINTS Plant ascorbate peroxidase signature 88 106 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01246 280 PRINTS Plant ascorbate peroxidase signature 107 119 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01246 280 PRINTS Plant ascorbate peroxidase signature 128 145 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01246 280 PRINTS Plant ascorbate peroxidase signature 146 167 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01246 280 PRINTS Plant ascorbate peroxidase signature 168 192 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01246 280 PRINTS Plant ascorbate peroxidase signature 220 244 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca06g01246 280 ProSiteProfiles Plant heme peroxidase family profile. 22 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01246 Cca-Chr6 26937426 26939866 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01246 34 239 Peroxidase AT4G16270 31.746 6.82e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01246 K00434 - gmx:100806101 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01114 03 26997622 26998224 Cca06g01246 06 26937426 26939866 ECH
Cca06g01246 06 26937426 26939866 Cca06g01246 06 26937426 26939866 ECH