Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01215 ATGAAAGCAATGACAGCAACAACGTTTGATGTCTCTGCCGCTTGCTTCCGTGCTCCTCCTTCACGTTCTCTCCTCTTCTCATCCAATCTATGCCATACAAGCTCTTCAATTCTGAACTCCCTGAATTCTCACAAGGGACGGTTTAGCGTTTCTGTCCCACCCAAGTTTCCAAACTTCCGGAGGGAAGTTGGTATGAAGGGAAATTTGGAGGCTGTTAGAGTTCCAACTTCAGTGCCTGTGCGTGTAGCATACGAGCTTCTTCTAGCTGGTCATAAGTATTTGGATGTAAGGACCCCTGAAGAGTACCATGCTGGACACGCTCCTGGCGCAGTTAACATACCTTACATGTTCAGAGTTGGATCAGGTTCTATTTCAGTTCTTAAATCATACATTAAATCTTAA 402 0.4502 MKAMTATTFDVSAACFRAPPSRSLLFSSNLCHTSSSILNSLNSHKGRFSVSVPPKFPNFRREVGMKGNLEAVRVPTSVPVRVAYELLLAGHKYLDVRTPEEYHAGHAPGAVNIPYMFRVGSGSISVLKSYIKS 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01215 133 Gene3D - 63 130 IPR036873 -
Cca06g01215 133 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 1 123 - -
Cca06g01215 133 Pfam Rhodanese-like domain 92 113 IPR001763 -
Cca06g01215 133 ProSiteProfiles Rhodanese domain profile. 87 116 IPR001763 -
Cca06g01215 133 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 1 123 - -
Cca06g01215 133 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 73 118 IPR036873 -
Cca06g01215 133 CDD RHOD 94 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01215 Cca-Chr6 26561621 26564253 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01215 66 122 Sulfurtransferasese or Rhodanese AT4G35770 64.407 2.22e-22 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01215 - - aprc:113868825 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01215 06 26561621 26564253 Cca11g01072 11 25647474 25650757 PCT