Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01177 ATGGGAGGCTTATTACACTTTTTTGAATTCCATCAGGGGAGGATGGCCAAAAAAGTCCTTGCTCGTAAGAGACATCCTGGTGGTCTGGATGCTCCTCGAAATAGTCTAGATTTGCAAGTAGAAACACCTCAGAACTACCGACCAGAAGGAGACTTACCATACACTTATCAAGTTGAAGAAGAGAATAATCGTTCTTCAAATGTGGGTTCAATGAAAAAACTGATCAATGAGGAGCTATCCAAACAATCAAGCACCAGACAAAATGCGCCAAGCCTTGTGGCAAGGTTGATGGGGATAGATTCGATGCCACTGGAGACTAAATATGTTGTTCCATCAGATAAAAGAATAATTGAAAATAAGGGGAAGAGGTCTTCAGACAAAGGAATGAATAGAAGGGGTTCAGTTAGTTGGGGTTCTTCCAACTTTAACTCTTCTAGCCAGATGGATTTTGAATCATTATATGTAGACATAgatgatgatgatgatgatggatgGAATCATAGTTTTGGAGAACCAAGGCCACGAGATCATCCTCAAGAAGAGGAACTCCAGAAATTCAAGGAAGAGTTTGAAGCATATCAATCAGCAAGGTTTCTGGAGTGTTCAAAGGTTGTTGATATTGGTAGTGTTCCTAGACGATTGCTTGCTCAAGAAAACCTGAAGAAGGAAAAGGTGGCACATAATGATTCAGTTTTACAAAGGGCAGGAGCAGGGAAACTTGCAGATCTTGACAGCCGTTCATTCAAAACAAAGACACCTGACAGTTATAGTTCAGAATATCATGGTAACATGATGGACTTAATCCCAGCTATGCAAAGGAAAACCTTTCCTCCAAGGAGTAGAACACTAAGTAGAGACTTTGAGGAGACCTTAATGATGAAATCCTGCAACAGATTAGACATATCATCTTCTCCCACCAGGATTGTTATCTTGAAGCCTGGTCCTGATAGCATTTGCAACCATGAAGAGAATTGGACCATTTCTTCAGAAACTATACAAGGGAGAAATAGTATAGAGGATTTTCTTGAAGAGGTGAAAGAGCGTTTGAAATGTGAACTGCAAGGGAAAATTGTCAAAAAGGGTTCTGTGATTCGAGGGAGTGGAATTGAGACACCTTACAATGAAAAACCATCTAATCCTAAACTAATAGCCCGTCATATAGTAAAGCAAGTCAAAGAAAGTGTGGCTAGAGATGCTGAAACAAATTTACTCCCCTCAGAATCAACAGGATCATACAAAAGCGAAATGCAGTTAAATGGACCAAGCTCCCCAGAAATTGTCAGCAGAGATACCAGGAGGTTCTGGTCAGAGAGGCTAAGAAACGTAATGAGAAATGAAACACGTGCTGACATTCCTGAGGGAAAATCAAGGTCACTTGCATTAGACAACCATAAAGCTAGACTAAAGCAAATGGGGGATATTAGGAAGTATGCAAGTAACTGGGAAATTTCCAAAGAGGACACATCAATACAAACAGGATCTTTCAGGCATGAACTGGATGAGAATATGTTGCTCCACAAGGAGTTGTCCCCAAGGAACCTTGTAAGATCCTTGTCTGCTCCTGTATCACGATCAGGAACATCATTTGGGAAGCTTCTTCTAGAGGACCGCCACATTTTAACTGGTGCTCAGATTCGGAGAAAGCTTGAAGCTGTTGAAACCATGTCTGTTGATGTCAAAAAACCAAAAAAGGACAGATTTAATATTAAAGAAAGAGTCTCCAATTTTAGATATAGTCTTGCTCTAAGAAGGAGGCTTTTTGGCAGAAGGATTCAGTCAATGGTAGAATCACATGGCAATGAATATGGTCCTATGGTGAGAGATGTCACAAGTGGACCAACAGTTCTCATGAACTGTGGTGAGAGGCATGAGAACTCCACTGAGGTACCTCCGAGTCCTGCATCTGTGTGTAGCAGTGTTCATGAAGACTTTTGGAGGCGGACTGAATATTTAAGTCCAATATCAACTCCTGACGTGTCTTCAAGAGACGATAATGTTGTGCCCCAAGTTTTCAGAGATATCAGCTCTGGTTTGAATGAGCTAAGGAGACAACTCAATCAACTTGAATCCAATGGTCGTGAGGACTTCACTGTGAAACAGGAGCCTGCTGAGTCTGAATTAGATCAATTAGAGGATCCAGCAGAATCTTACATAAGAGATCTACTTGTTGCTTCTGGTCTTTACTTTGGTTCGTGGGATAAATCTTTATTAAGAGGGGACACGTTTGCAAAGCCTATTGGCAACTCTGTTTTTCAAGAAGTGGAAGAATCTCGCAAGAAACGGGTCAACGAAAATGATGAAAGCTGTATGAAGGATCAGAGTGAGAATAAGCATGACCACAAGGTTTTGCTTGATTTGTTAAATGAGGCACTTTCAGTTGTTCTTGGTCCACCTTTGACATTGTCTAGATTCAGAAGGAAATTAAGCAACTCTTCCATGTTGCTACCACCTTCTGGAAAGGAACTGTTGAACTTAGTATGGGACATTATCCGTGTTTCTTTATATCCTCCATCTGACATATCTACTTATTCACTTGATACTTTGGTGGCTCAACACCTAGGATCCATCCCTTGGTCTGGATTGATAAATGACGAGATCAATATATTGGAAAGAGATATAGAATGGCTAATAACTGATGATCTGGTTGAAGAACTCACAAAGGATATGTTTTAA 2673 0.4025 MGGLLHFFEFHQGRMAKKVLARKRHPGGLDAPRNSLDLQVETPQNYRPEGDLPYTYQVEEENNRSSNVGSMKKLINEELSKQSSTRQNAPSLVARLMGIDSMPLETKYVVPSDKRIIENKGKRSSDKGMNRRGSVSWGSSNFNSSSQMDFESLYVDIDDDDDDGWNHSFGEPRPRDHPQEEELQKFKEEFEAYQSARFLECSKVVDIGSVPRRLLAQENLKKEKVAHNDSVLQRAGAGKLADLDSRSFKTKTPDSYSSEYHGNMMDLIPAMQRKTFPPRSRTLSRDFEETLMMKSCNRLDISSSPTRIVILKPGPDSICNHEENWTISSETIQGRNSIEDFLEEVKERLKCELQGKIVKKGSVIRGSGIETPYNEKPSNPKLIARHIVKQVKESVARDAETNLLPSESTGSYKSEMQLNGPSSPEIVSRDTRRFWSERLRNVMRNETRADIPEGKSRSLALDNHKARLKQMGDIRKYASNWEISKEDTSIQTGSFRHELDENMLLHKELSPRNLVRSLSAPVSRSGTSFGKLLLEDRHILTGAQIRRKLEAVETMSVDVKKPKKDRFNIKERVSNFRYSLALRRRLFGRRIQSMVESHGNEYGPMVRDVTSGPTVLMNCGERHENSTEVPPSPASVCSSVHEDFWRRTEYLSPISTPDVSSRDDNVVPQVFRDISSGLNELRRQLNQLESNGREDFTVKQEPAESELDQLEDPAESYIRDLLVASGLYFGSWDKSLLRGDTFAKPIGNSVFQEVEESRKKRVNENDESCMKDQSENKHDHKVLLDLLNEALSVVLGPPLTLSRFRRKLSNSSMLLPPSGKELLNLVWDIIRVSLYPPSDISTYSLDTLVAQHLGSIPWSGLINDEINILERDIEWLITDDLVEELTKDMF 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01177 890 MobiDBLite consensus disorder prediction 404 426 - -
Cca06g01177 890 Pfam Domain of unknown function (DUF4378) 716 884 IPR025486 -
Cca06g01177 890 Coils Coil 671 691 - -
Cca06g01177 890 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 889 - -
Cca06g01177 890 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 889 - -
Cca06g01177 890 MobiDBLite consensus disorder prediction 120 140 - -
Cca06g01177 890 Pfam DUF761-associated sequence motif 85 103 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01177 Cca-Chr6 26152505 26158519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01177 71 889 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 40.142 5.05e-148 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01177 - - gmx:100789616 1508.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01177 06 26152505 26158519 Cca06g01177 06 26152505 26158519 ECH