Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01163 ATGAGTAGTTCAAAGTTGAGAAACCTGTTCTGGGGTGTGTTGTTTTCATGGATATGGTTTGGAGGTTTGGCCATGGCGGCAAGTGACAGTAGCAGCAGCAGCTCCAGAGACCTGGACCAGACACCAACGTGGGCCGTTGCTGCTGTGTGCACTGTTTTCATTTTGATATCCATAACATTGGAAAAGAGTCTCCACAAACTTGGCACGTGGCTTGGACAAAAGCATAAGAAGGCTATGCTGGAAGCTCTGGATAAGGTCAAAGCTGAGTTGATGATTTTAGGGTTCATTTCACTTCTTTTGACTTTCGGGCAGAGCTATATTGTCAAAATATGCATTTCTGAAAAGATCGCATCCAAAATGTTGCCATGTCCATATAACTATGAGAGTACCGATAGTGCGTCAGATACTGAAGAGAACCATCGTAGGAAACTTCTGTCATATGAACGTAGATATTTAGCTGCTGATACTACCTCGTACAAATGCAGCAAGGAGGGACATGAGCCACTTTTATCTGTCAATGGATTGCACCAGTTACACATCCTCATATTCTTCTTAGCAGTTTTTCATGTGCTTTACAGTGCTATCACAATGCTCCTTGGAAGACTAAAGATACGTGGTTGGAAGGCATGGGAGGCAGAGACTTCTACTCATGATTATGAGTTCGCTCATGATGCTTCAAGATTTAGGCTTACACATGAAACATCATTTGTGAGGGCCCATGCAAGTTATTGGACAAGGATTTCCATCTTCTTCTATATTAGCTGCTTCTTTAGGCAGTTTTATAGGTCTGTCCGTAAGACTGACTTCCAGACTTTGCGCCACGGGTTTATCAATGTCCACCTGGCTCCTggaagtaaatttaatttccaaaagtatatcaaaagatcattagaagatgatttcaaggtggttgtgggagtcagTCCTGTCCTCTGGGCATCAGTTGTAGTTTTTCTACTCATCAATGTTAATGGATGGCGTACTCCAATTTGGGCAGCCTTAATCCCTATTATTATAATTTTGGCCGTTGGAACAAAACTTCAAGCCATATTGGCCAGGATGGCTCTTGATATCACCGAAAGACATGCAGTTGTCCAAGGAATGCCTCTTGTCCAAGGCTCAGACAAATACTTTTGGTTTGGTCAGCCACAGTTGGTTCTTCATCTTATCCATTTTGCTTTGTTCCAGAATGCGTTCCAAGTAACATATATCTTGTGGATATGGTATTGTTTTGGGGTGAGAAACTGTTTCCGTACTGACTACAAGCTTGCCATGATAAAAGTAGCTATAGGGGTTGTGATGCTATGCCTCTGCAGCTATATCACCCTTCCATTATATGCTCTTGTAACTCAGATGGGTTCAAGGATGAAGAAAGCAATATTTGATGAGCAAACAAGCAAGGCTCTAAAGAAATGGCACATGGCTGTGAAAAAGAAGCATGGAGCAGTGAAGCTGGGAAAGTCGAGTGCACGTACCTTAGATAATGGAAGCCCCATTGGTTCAACAATGAGCTCCCCTGGGCCCACACTGCACCGTTTCAAAACAACCGGCCACTCAACCCGCTCTTCAACGTACGAGGATCAAGACGATTATGAGTCCGATGATGTTGAGGTGTCTCCCGTGTCGCAAACAACTAGCTTCATTGTAAGAGTGGATCCTGGTGAGCAACATGCagaagaagaagaagaagaTCATAAACACCATAGTCATAGTGAGGGAGAAATCAACGATGAAGCTGAATTCACCTTCGTCAAACTCAAACCTCATCCTGGGCAAAGAACCACCACGTAG 1791 0.4165 MSSSKLRNLFWGVLFSWIWFGGLAMAASDSSSSSSRDLDQTPTWAVAAVCTVFILISITLEKSLHKLGTWLGQKHKKAMLEALDKVKAELMILGFISLLLTFGQSYIVKICISEKIASKMLPCPYNYESTDSASDTEENHRRKLLSYERRYLAADTTSYKCSKEGHEPLLSVNGLHQLHILIFFLAVFHVLYSAITMLLGRLKIRGWKAWEAETSTHDYEFAHDASRFRLTHETSFVRAHASYWTRISIFFYISCFFRQFYRSVRKTDFQTLRHGFINVHLAPGSKFNFQKYIKRSLEDDFKVVVGVSPVLWASVVVFLLINVNGWRTPIWAALIPIIIILAVGTKLQAILARMALDITERHAVVQGMPLVQGSDKYFWFGQPQLVLHLIHFALFQNAFQVTYILWIWYCFGVRNCFRTDYKLAMIKVAIGVVMLCLCSYITLPLYALVTQMGSRMKKAIFDEQTSKALKKWHMAVKKKHGAVKLGKSSARTLDNGSPIGSTMSSPGPTLHRFKTTGHSTRSSTYEDQDDYESDDVEVSPVSQTTSFIVRVDPGEQHAEEEEEDHKHHSHSEGEINDEAEFTFVKLKPHPGQRTTT 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01163 596 MobiDBLite consensus disorder prediction 553 584 - -
Cca06g01163 596 Pfam Mlo family 36 492 IPR004326 GO:0006952|GO:0016021
Cca06g01163 596 MobiDBLite consensus disorder prediction 480 596 - -
Cca06g01163 596 PANTHER MLO-LIKE PROTEIN 1 23 581 IPR004326 GO:0006952|GO:0016021
Cca06g01163 596 PANTHER MLO-LIKE PROTEIN 23 581 - -
Cca06g01163 596 MobiDBLite consensus disorder prediction 490 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01163 Cca-Chr6 26016337 26021989 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01163 24 588 MLO family AT2G17480 59.413 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01163 K08472 - gmx:100790155 944.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01163 06 26016337 26021989 Cca06g01163 06 26016337 26021989 ECH
Cca06g01163 06 26016337 26021989 Cca11g00949 11 20327194 20332943 ECH