Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01159 ATGGATAGAAGAATCTGCGAAGAATTAACGCCTAGGTATTATGCCCTTTGTGCCATTGGAGGAATGCTCAGTGCTGGCACCACCCACCTTGCCATCACTCCTCTTGATGTCTTGAAAGTCAACATGCAGGTGCACCCAATTAAGTATTACAGTATTTCCTCATGCTTTACTACCTTATTGAGGGAACAAGGGCCTTCTGTCCTTTGGAAAGGTTGGACTGGCAAGTTTTTTGGCTATGGCGCTCAAGGAGGATGCAGATTTGGCCTCTATGAGTATTTTAAAGGGGTTTATTCCAACGTATTGGTAGACCAGCACAAGAGTCTTGTTTTCTTTCTTAGTAGTGCTTCTGCTGAAGTGTTTGCCAATGTAGCTCTGTGTCCATTTGAAGCTGTTAAAGTGAGGGTTCAAGCACAACCCTGTTTTGCTAAGGGCTTGTTTGATGGCTTTCCAAAGTTATATGCATCAGAAGGCACACGAGGATTCTACCGTGGACTAATTCCACTTTTGGGTCGAAACATTCCATTTTCCATGGTTATGTTCTCAACCTTCGAGCATTCTGTTGATTTTTTGTATCAAAACGTGGTCAAAAGAAAAAAGGAGGACTGTTCAATTGGTCAACAACTTGGTGTGACATGTTTAGCTGGATATGCAGCGGGATCTGTTGGTAGCTTTGTTTCTAATCCCGCTGACAATATTGTATCTTCTCTTTATAACAGAAAGGCTGATAGTCTTGCACTGGCTATCAGACATATTGGACTAGCCAATTTATTTACCAGGAGCCTTCCTATTAGAATGTTGCTGGTTGGTCCTTCTATAACATTGCAATGGTTTTTTTATGACACCATCAAAGTTTTAGGTGGATTGCCAACTAGTGGTGAAGTTACAACTGACATAAGAAGAGACGCGGCAGGCTAG 915 0.4219 MDRRICEELTPRYYALCAIGGMLSAGTTHLAITPLDVLKVNMQVHPIKYYSISSCFTTLLREQGPSVLWKGWTGKFFGYGAQGGCRFGLYEYFKGVYSNVLVDQHKSLVFFLSSASAEVFANVALCPFEAVKVRVQAQPCFAKGLFDGFPKLYASEGTRGFYRGLIPLLGRNIPFSMVMFSTFEHSVDFLYQNVVKRKKEDCSIGQQLGVTCLAGYAAGSVGSFVSNPADNIVSSLYNRKADSLALAIRHIGLANLFTRSLPIRMLLVGPSITLQWFFYDTIKVLGGLPTSGEVTTDIRRDAAG 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01159 304 Gene3D Mitochondrial carrier domain 14 286 IPR023395 -
Cca06g01159 304 SUPERFAMILY Mitochondrial carrier 13 281 IPR023395 -
Cca06g01159 304 PANTHER PHOSPHATE CARRIER PROTEIN 2 302 - -
Cca06g01159 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 12 96 IPR018108 -
Cca06g01159 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 285 IPR018108 -
Cca06g01159 304 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 2 302 IPR044677 GO:0005315|GO:1990547
Cca06g01159 304 Pfam Mitochondrial carrier protein 110 193 IPR018108 -
Cca06g01159 304 Pfam Mitochondrial carrier protein 17 98 IPR018108 -
Cca06g01159 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 189 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01159 Cca-Chr6 25977836 25982627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01159 4 303 Chloroplast and Mitochondria Gene Families AT2G17270 66.445 3.41e-153 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01159 K15102 - gmx:100788561 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01159 06 25977836 25982627 Cca06g01159 06 25977836 25982627 ECH