Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01157 ATGAAGGACACTAAGGAATCCCAAGTTGCCGATTCCAACAAAAACAACATGGATTCTATGGCTTTATCTGATGTTGTTGTCACCTACGATTTTGAGATGGGACAGCCCAGTGCTGAAGTTCCTCCGCCGTTTGCCGCCGCCAGCAACTCATTGTTTCCGGCGGCACCTATCGGAATGAATGGATCAAATCAGAATTTCTTTCGGGCAACGGTGGTGGAAGTGGATTGCTGTGAGGATGTTTTAGAGAAAATAATGCCATATGCTGCAAAGAATGAGATTTTCATCTTAGGAGGGAATGGTGAAGTATCGTACATTGAACTTGTGAATCCACAAAAGGCTCCCGTACCAAACACTGTTTTACAAGGAAATTTCGAGATATCCGCAATGGAGGGTAATGTTGTACGACAATACAACGGTGACAAGAAGAAAATGAGTGAGGTGACAGTTTTAGTGGCCGGAACTGATGGTCGGATTCGAGGAGGACCTGTACGAAGCTTAATTGCTAAATCCTCAGTTAAGGTGATTGTGAGCACAACGAGTAAATGTGATGTACATGGCATGGTAAGTAAAGAATATCCTATGGGAAATAGGCATCCACCATTCGAGGACCAAGCTAAACGTTTGGAAGATGTAGTGGATCAGATTTATAAGGAAACATTGAAGGAGCTCAATCAAACAAATTAA 684 0.4284 MKDTKESQVADSNKNNMDSMALSDVVVTYDFEMGQPSAEVPPPFAAASNSLFPAAPIGMNGSNQNFFRATVVEVDCCEDVLEKIMPYAAKNEIFILGGNGEVSYIELVNPQKAPVPNTVLQGNFEISAMEGNVVRQYNGDKKKMSEVTVLVAGTDGRIRGGPVRSLIAKSSVKVIVSTTSKCDVHGMVSKEYPMGNRHPPFEDQAKRLEDVVDQIYKETLKELNQTN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01157 227 CDD DUF296 68 178 IPR005175 -
Cca06g01157 227 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 67 177 IPR039605 GO:0003680
Cca06g01157 227 SUPERFAMILY AF0104/ALDC/Ptd012-like 65 185 - -
Cca06g01157 227 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 67 177 - -
Cca06g01157 227 Gene3D - 68 194 - -
Cca06g01157 227 Pfam Plants and Prokaryotes Conserved (PCC) domain 69 178 IPR005175 -
Cca06g01157 227 ProSiteProfiles PPC domain profile profile. 64 200 IPR005175 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01157 59 176 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 30.579 1.81e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01157 - - ccaj:109807597 283.878