Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01149 ATGTCATATTTCAGTTATGCTAGAAGCAGCAGTACCTTCTTTTATCTGTTTCTTGCAGTGCTTGTTGTAAAAACTGGCTTTTGCTTCTCTTCTAAGGTTTATGTAGTGTACATGGGAAGCAAAACTGGCCAAGACGCAGATGATTTTCTGAAGCACCATCATCAAATGCTTGCAGTTGTTCACAGTGGAAGTATTGAGCAAGCTCAAGCTTCTCATGTTTATAGCTATAGACATGGTTTCAGAGGTTTTGCAGCCAAGTTGACTGATGAACAGGCTTACCAAATTTCAAAGATGCCAGGAGTGGTATCTGTTTTTCCCAATGCTAAAAGAAAGCTTCACACCACTCATTCATGGGACTTTATGGGACTTTTGGAAAACGATTCAATGGAGTTTCAAGGGCACTCCACCAAAAACCAAGAAAATATTATCATTGGTTTCATTGACACGGGAATTTGGCCCGAATCCCCAAGTTTTAGAGACACCGACATGCCCCCGGTGCCCCGGGGATGGAAGGGCAAATGTCAATTAGGAGAAGCATTCAATGCTTCATCATGCAACAGGAAAGTGATAGGAGCAAGATACTACATGAGTGGACATGAAGCAGAAGAAGGGTCAGAGAGAAAAGTCTCTTTCAGATCTGCCAGAGATAGCTCAGGTCATGGTAGCCACACAGCTTCCACAGCAGCAGGACGCTACGTGGCAAACATGAACTATAGGGGGCTAGGAGCTGGAGGAGCAAGGGGAGGTGCACCTATGGCTAGGGTTGCTGTGTACAAAGCATGTTGGGACTCTGGTTGCTATGATGTGGACTTGCTAGCTGCATTTGATGATGCCATAAGTGATGGTGTTCACATTATATCTTTGTCTCTTGGTCCTGAAGCTCCCCAAGGTGACTATTTCAGTGATGCCATGTCTGTGGGGTCATTCCATGCTTCTAGGCATGGAGTGCTGGTGGTAGCATCTGTTGGGAATGAAGGAAATCCTGGTTCAGCAACGAATGTCGCACCATGGATGATCACAGTTGGTGCTAGCTCAATGGATAGGGATTTCACCTCTGATATCACACTAGGACATGGTGTTAACATCACGGGTGAGAGTCTTGGCCTCCTGGAAATGAATGTCTCCAGAAGATTGATTGATGCATCTGAAGCCTTTGCAGGATACTTCACTCCTTATCAATCCAGTTACTGTGTGGATAGTTCCCTAAATAAGACCAAGGCCAAAGGGAAGGTTCTTGTGTGTCGACATGCGGAAGATTCAACCGAGTCAAAGTTGGAAAAGAGTAAGATAGTGAAAGAGGCAGGTGCTGTTGGGATGATACTCATTGATGAGGCAAATCAAGGTATTGCTGTCCCATTTGTGATACCTTCAGCTGTTGTTGGAACGAAAACAGGAGAACGGATTCTGTCCTATATCAACGGCACACGTGTGCCTATGTCAAGGATTTCCAGAGCTAAGACAGTACTAGGAGTTCAGCCTGCACCCCGTGTAGCAGCATTTTCTTCTAAAGGCCCCAATTCATTAACCCCAGAAATTTTGAAGCCTGATATTACAGCTCCGGGATTAAACATCCTTGCAGCATGGTCTCCAGCTGCAGCTGGAATGAAGTTCAATATTGTATCAGGAACTTCTATGGCTTGTCCTCATGTTACTGGAATTGCAACCTTGGTCAAAGCTGTGCATCCTTCATGGTCTCCTTCTGCTATCAAATCCGCTATCATGACAACTGCAACAATTCTGGACAAGCACCACCAACCCATTAGAGCAGATCCTCATAGAAGAAAGGCTAATGCATTTGATTATGGATCAGGGTTTGCGAACCCTGCAAGAGTTCTAGATCCTGGTCTTGTCTATGATTCACATCCACAAGATTTTGTAGCGTTCCTCTGTTCACTTGGTTATGATGAGAGGTCACTCCATCTTGTCACAAGAGACAACAGCACCTGTGATAGGGCATTCAAAACACCATCTGACCTCAATTATCCATCTATTTCAGTGCCGAATCTTGAAGACAACTTTACAGTAACTCGAGTTGTGACCAATGTAGGAGAAGCAAGAAGTATATATAAAGCAACAGTGTTGTCTCCGGCTGGAATTAATGTTACTGTTGTGCCAAATCGGTTAGTCTTCACAAGAGTAGGACAGAAGATCAAGTTCACTGTGAATTTCAAAGTGGCCACTCCCTCAAAGGAATATGCATTTGGGTTCTTGTCTTGGAAAAACAGAAAATCACAGGTCACCAGTCCTATAGTTGTCAGGGTTGCACCAGCAAGTCGTGTGTTGGTCAGATAA 2292 0.4442 MSYFSYARSSSTFFYLFLAVLVVKTGFCFSSKVYVVYMGSKTGQDADDFLKHHHQMLAVVHSGSIEQAQASHVYSYRHGFRGFAAKLTDEQAYQISKMPGVVSVFPNAKRKLHTTHSWDFMGLLENDSMEFQGHSTKNQENIIIGFIDTGIWPESPSFRDTDMPPVPRGWKGKCQLGEAFNASSCNRKVIGARYYMSGHEAEEGSERKVSFRSARDSSGHGSHTASTAAGRYVANMNYRGLGAGGARGGAPMARVAVYKACWDSGCYDVDLLAAFDDAISDGVHIISLSLGPEAPQGDYFSDAMSVGSFHASRHGVLVVASVGNEGNPGSATNVAPWMITVGASSMDRDFTSDITLGHGVNITGESLGLLEMNVSRRLIDASEAFAGYFTPYQSSYCVDSSLNKTKAKGKVLVCRHAEDSTESKLEKSKIVKEAGAVGMILIDEANQGIAVPFVIPSAVVGTKTGERILSYINGTRVPMSRISRAKTVLGVQPAPRVAAFSSKGPNSLTPEILKPDITAPGLNILAAWSPAAAGMKFNIVSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTATILDKHHQPIRADPHRRKANAFDYGSGFANPARVLDPGLVYDSHPQDFVAFLCSLGYDERSLHLVTRDNSTCDRAFKTPSDLNYPSISVPNLEDNFTVTRVVTNVGEARSIYKATVLSPAGINVTVVPNRLVFTRVGQKIKFTVNFKVATPSKEYAFGFLSWKNRKSQVTSPIVVRVAPASRVLVR 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01149 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Cca06g01149 763 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 756 IPR045051 -
Cca06g01149 763 MobiDBLite consensus disorder prediction 205 226 - -
Cca06g01149 763 ProSiteProfiles Serine proteases, subtilase domain profile. 117 612 - -
Cca06g01149 763 Pfam Fibronectin type-III domain 658 752 IPR041469 -
Cca06g01149 763 Gene3D - 347 489 - -
Cca06g01149 763 Gene3D - 629 755 - -
Cca06g01149 763 Pfam Subtilase family 140 580 IPR000209 GO:0006508|GO:0008236
Cca06g01149 763 Pfam PA domain 385 468 IPR003137 -
Cca06g01149 763 Gene3D Peptidase S8/S53 domain 141 625 IPR036852 GO:0004252|GO:0006508
Cca06g01149 763 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Cca06g01149 763 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Cca06g01149 763 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Cca06g01149 763 CDD PA_subtilisin_like 353 482 - -
Cca06g01149 763 CDD Peptidases_S8_3 111 578 IPR034197 -
Cca06g01149 763 SUPERFAMILY Subtilisin-like 14 713 IPR036852 GO:0004252|GO:0006508
Cca06g01149 763 Pfam Peptidase inhibitor I9 33 113 IPR010259 -
Cca06g01149 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 29 113 IPR037045 -
Cca06g01149 763 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 21 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01149 Cca-Chr6 25773892 25777948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01149 31 754 Subtilisin-like Serine Gene Family AT2G04160 43.634 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01149 - - gmx:100780538 1362.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01149 06 25773892 25777948 Cca06g01149 06 25773892 25777948 ECH