Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01147 ATGTTTCCCCGCCAATGCAGCAACGACCACCGCCTGCGAGCTTGCTCCGCCGCCATCGCCGCCGTCGCCACCATCCTCCTCCTATTGCCGGCGTCAACTTCCCAAGCTCAGATTTTGAAAACGGAGAGCCACATGTTCGGCCCCTTCTACGACAACCAGTCCTACTCCAACACCTTCTCGCTCCTCTCCAGCGCCGCCGTCCACCTCGGCGCCATCCAAGTCACCCCCGACAGCGCCGGCGACGTGGTCCTCACCAACCGCTCCGGCAGAGTCCTCTTCAAGAACCCCTTCACTCTCTGGAACGACCGCGCCACCCAGCTCGTCTCCTTCAACACCTCCTTCCTCGTGAACGTGTACCGCCCCAAGAACAACGACACTCCCGGCGAGGGCATCGCGTTCCTCATCGCGCCGTCGCTCTTCTCCGCCCCGCTCAACAGCCACGGCCAGTTCCTCGGCCTCACCAACGCCTCCACCGACGGCAACGCCACCAACCAAATCCTCGCCGTCGAACTCGACACCGTCAAGCAGGAGTTCGACCCCGACGACAACCATATCGGTCTCGACGTTAACGGCGTGAGGTCCAACGTCGCCGTCCCCCTCACCCCCTTGGGCTTCCAGATCGCGCCCAATGGCACGCGCTTCCACGTCGTCTGGGTCCAATACGACGGCCGCCGGAAACAAATCCACGTGTACATCGCGGAGCAGAGTGACAAAGACGCGCCTATCGTGGCGAAACCGGCTCAGCCGGTCTTGAATTCGAGTCTCGATCTAACGCAAGTGCTGAACCGGGTTTCTTACTTTGGGTTCTCCGCTTCGACCGGTGAGAACGTTGAGTTGAACTGCGTGCTGAGGTGGAACATTTCGATTGAGGTTTTTCCAGACAAGGGTGGGATTGGAAATGCGCTGAAGATTGGGTTGGGTGTGGGGATTCCTACTCTGGTTCTTATTGTTGCGTGTTTTGTTGGCTGGGTTTTGTGGCTGCGAAGGAAGAATAAGGAAAGTGAGAGTAACATTTTGGGGACTCTCAAGACTTTACCTGGAACTCCCAGAGAGTTCAGGTTTCAGGAACTGAAGAAAGCCACTAATAATTTCGACGACAAGCTCAAGCTTGGACAGGGTGGATACGGTGTCGTTTATCGTGGCACTCTTCCCAAGGAGAAGTTGGAAGTCGCGGTTAAGATGTTCTCCAGAGATAAGATGAAAAGTGCTGATGATTTCTTGGCGGAACTCACCATTATCAATCGCCTCCGTCACAAGAACCTTGTTCGCTTACTAGGATGGTGTCACAAAAACGGGGTGTTGCTCTTAGTGTACGATTACATGCCAAATGGAAGCTTAGACAACCACATATTCTGCGAGGAAGGGagcagcagcagcagcagcaCGCCACTAAGTTGGCATCTAAGGTACAAGATCATAACAGGTGTGGCTTCAGCATTGAACTACCTCCACAACGAGTACGATCAGAAAGTGGTCCACAGAGACCTGAAAGCCAGCAACATCATGCTGGACTCAGACTTCAATGCTCGTTTGGGCGACTTCGGCTTGGCTCGAGCACTGGAGAATGACAAAACATCGTACGCAGAGTTAGAAGGAGTGCATGGCACAATGGGGTACATTGCACCCGAGTGCTTCCACACGGGCAGAGCCACACGTGAGTCAGATGTTTACGGGTTCGGAGCAGTGCTCCTTGAGGTGGTGTGTGGTCAAAGACCATGGACAAAGAACGAGGGCTATGAGTGCTTGGTGGATTGGGTGTGGCACCTGCATCGCGAGCAAAGGATACTGGATGCAGTGGATCCCAGACTTGGGAATGAGTGTGTGGTGGAAGAGGCAGAGAGGGTTCTGAAACTAGGACTAGCATGCTCTCACCCTGTTGCGAGTGAGAGGCCTAAGATGCAAAGCATTGTTCAGATACTATCTGGGTCAGTGCATGTGCCTCATGTGCCACCTTTCAAGCCAGCGTTCGTGTGGCCAGCGGTGGATCTTTCAAGCCTTGCAAGTGACCTTACGGCTTCCACTACAACTACTGAGTACACTCCCATGAACAGTAACACACATTCTATACGTGTTGAATTCTCTGATACCAGTTCTCCCGTCTCAACTAAACACACCATGCATTAA 2124 0.5353 MFPRQCSNDHRLRACSAAIAAVATILLLLPASTSQAQILKTESHMFGPFYDNQSYSNTFSLLSSAAVHLGAIQVTPDSAGDVVLTNRSGRVLFKNPFTLWNDRATQLVSFNTSFLVNVYRPKNNDTPGEGIAFLIAPSLFSAPLNSHGQFLGLTNASTDGNATNQILAVELDTVKQEFDPDDNHIGLDVNGVRSNVAVPLTPLGFQIAPNGTRFHVVWVQYDGRRKQIHVYIAEQSDKDAPIVAKPAQPVLNSSLDLTQVLNRVSYFGFSASTGENVELNCVLRWNISIEVFPDKGGIGNALKIGLGVGIPTLVLIVACFVGWVLWLRRKNKESESNILGTLKTLPGTPREFRFQELKKATNNFDDKLKLGQGGYGVVYRGTLPKEKLEVAVKMFSRDKMKSADDFLAELTIINRLRHKNLVRLLGWCHKNGVLLLVYDYMPNGSLDNHIFCEEGSSSSSSTPLSWHLRYKIITGVASALNYLHNEYDQKVVHRDLKASNIMLDSDFNARLGDFGLARALENDKTSYAELEGVHGTMGYIAPECFHTGRATRESDVYGFGAVLLEVVCGQRPWTKNEGYECLVDWVWHLHREQRILDAVDPRLGNECVVEEAERVLKLGLACSHPVASERPKMQSIVQILSGSVHVPHVPPFKPAFVWPAVDLSSLASDLTASTTTTEYTPMNSNTHSIRVEFSDTSSPVSTKHTMH 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01147 707 ProSitePatterns Legume lectins beta-chain signature. 167 173 IPR019825 -
Cca06g01147 707 SMART serkin_6 364 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g01147 707 SUPERFAMILY Concanavalin A-like lectins/glucanases 49 294 IPR013320 -
Cca06g01147 707 ProSiteProfiles Protein kinase domain profile. 364 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g01147 707 MobiDBLite consensus disorder prediction 688 707 - -
Cca06g01147 707 PANTHER - 22 688 - -
Cca06g01147 707 Gene3D - 44 294 - -
Cca06g01147 707 CDD STKc_IRAK 370 640 - -
Cca06g01147 707 SUPERFAMILY Protein kinase-like (PK-like) 347 675 IPR011009 -
Cca06g01147 707 Gene3D Transferase(Phosphotransferase) domain 1 441 646 - -
Cca06g01147 707 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 22 688 - -
Cca06g01147 707 Pfam Legume lectin domain 48 290 IPR001220 GO:0030246
Cca06g01147 707 Pfam Protein kinase domain 366 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g01147 707 CDD lectin_legume_LecRK_Arcelin_ConA 49 286 IPR001220 GO:0030246
Cca06g01147 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
Cca06g01147 707 ProSitePatterns Protein kinases ATP-binding region signature. 370 393 IPR017441 GO:0005524
Cca06g01147 707 Gene3D Phosphorylase Kinase; domain 1 349 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01147 Cca-Chr6 25761890 25766040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01147 52 652 Receptor kinase-like Gene Family AT2G37710 37.679 1.23e-124 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Cca06g01147 Pkinase 3.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01147 - - ccaj:109808759 1394.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01147 06 25761890 25766040 Cca06g01147 06 25761890 25766040 ECH