Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01145 ATGACCATTGATGTGCCACTATCCGGTGTCCAAAGTATGAGGACCAACAGATCCTCCTTTAGTTCTAGCAATGGCAATGAGGCTACCCCGTTACACAATTATGCATCTGTTAGCAATAGTGATGGCTATGATAGTGATGGCTCCAATTTTGCTCCACCCACACCAACAACTCTATCAATGGCTATTCCAGAAGAACTTGCTGGAGCTGTACCCTTGATTGATAGATTCCAGGTGGAAGGATTCTTAAAATTGATGCATAAACAAATTCAATCTGCTGGAAAACGTGGATTTTTTTCCAAAAGATCCGTGGGCCCCCAAGTTCGAGAGAAATTTACTTTTGAGGACATGCTTTGTTTCCAAAAGGATCCAATACCTACGTCATTGCTTAAGCTGAATGGTGACTTAGCAAGCCGAGCAACAAAATTATTTCAAATAATTTTAAAATATATTGGAGTTGATTCATCTGATCGTGTAACTCCAATAAGCCTAGATGAACGAGTTGAGCTTGTTGGTAAACTATACAAGCAAAGTTTGAAGCGTTCAGAACTCCGAGATGAACTTTTTGTGCAAATATCAAAACAAACAAGGAACAACCCTGAGAGGGAATGCTTGACTAAAGCATGGGAGCTAATGTTTTTATGTGCTTCGTCCATGCCTCCTAGTAAAGACATTGGAGCATATCTATCAGAATATGTTCATAATGTGGCACATGGTGTGACTACTGATCCTGAGATCCGAGCCCTTGCATTAAATACATTAAATGCTTTGAAGCACTCTGTCAAGGCTGGTCCTAGACATATAATACCTGGGCCTATTGAGATTGAAGCTCTGTTGACTGGGAAAAAGCTTACAACTATTGTATTCTTCCTGGATGAAACATTTGAGGAAATTACATATGACATGTCAACAACAGTTGCAGATGCTGTTCAGGAACTTGCTGGGATCATTAAACTGTCAACATACTCGAGTTTTAGCATGTTTGAATGTCGCAAAGTTGTTACTGGCTCCAAATCACCTGATTCTGGGAATGAGGAGTACATTGGGTTAGACGATAATAAATATATTGGGGATCTCCTGGCAGAATTTAAGGCAGTGAAAGATAGAAGTAAAGGAGAAATTTTGCAGTGTAAACTAATATTCAAGAAAAAGTTATTTCGTGAATCAGATGAAGCTGTGACAGATCCAATGTTTTTGCAGTTGTCCTATGTACAATTGCAGCATGATTATATAATGGGTAATTATCCTATTGGAAGGGATGATGCTGCCCAGCTTTCTGCATTGCAAATCTTGGCTGAGATTGGATTTGTTAGAAGACCCGAATCATGCACTGACTGGAATTCATTTCTGGAGCAATTTCTTCCTAGACAAATAGCAATGACTCGAGCAAAACGGGAATGGGAGTTGGACATTCTTTCTTGCTATCATTCACTGGCACATGTGACAAAAGATGATGCAAGGCAGCAATTTCTGCATGTATTGAGAACACTTCCCTATGGGTTTTCTGTTTTCTTCAATGTTCGCAAAATTGATGATCCTATTGGACTCTTGCCTGGACGAATAATATTGGGAATCAACAAGAGAGGGGTCCATTTTTTCCGTCCCATTCCAAAGGAATATATGCACTCTGCTGAGTTGAGAGACATAATGCAGTTTGGAAGCAGCAATACTGCAGTATTCTTTAAAATGCGAGTTGCAGGTGTTCTTCACATATTCCAGTTTGAAACAAAGCAGGGAGAAGAAATTTGTGTGGCTCTTCAGACACACATAAATGACGTAATGCTGCGCCGCTATTCCAAAGCAAGATCTGCTGCGGGTGATTCTTTGAGTGAAGACATTTCTAATAATTTTAAGCCTTCTAATTTGGAATCATATGAAAAACGTGTTCAAGATTTATCAAAACTTGTTGAAGAGTCTCAAAGGAATGCTGATCAATTGCTGGTAAAATTGCGTGAGAAGCAAAAACAAGAAGACGAAATGCTACAAGAATTAGAGGGCTTAAAAGAATCTTTAAAAGCTGATAAGCAGAGTCTCGCAGAAGTTACAAATGACCGTGACAAGCTTAGGTCATTATGCGATGAAAAAGATAAGGCACTTCAGGCTAAAATTCTAGAGAAAAGAAACATGGAAGCGAAGGTGACTAAGTTGAGTAATCTGGTTACTGAGAACACTGCCAAAAAGGACCCCATTCTAGCAAATAACCAAGTGTCACAAAAACTTGAAGATGACCTAAAACTATGTAAAGGTGAGCTGCTTGTAGCTGAAGAGACTATCAAAAGCTTGAGAAGTGAAAAATTTATTTTGGAACAGAAGCTATCTGAGCTTGAGAAGAAGAGTGCTGAAGAGATTAGTTCTCGTCAATTGAAACTTGAACAAGAACGCAAAACTCTGAACTCTCAAGTATATGACCTTGAACGAAAGCTGGATGTGCTTAGACAAGAATTAACTGTGGCAGAGTCTACACTTTCGGTCAAGGACTCTGAGTTGGCTGCATTGAAGAACAATTTAGATGAACTAGAAGAATTGAGAGAAATGAAAGAGGACATTGATAGAAAGAATGAACAAACAGCTGCCATACTGAAGATGCAAGCAGCTCAACTAACTGAAATGGAATTGCTTTATAAGGAAGAGCAGGTTCTCAGAAAGCGATATTTTAATACCATAGAAGATATGAAAGGCAAGATAAGAGTTTATTGTCGATTAAGACCTCTTAGTGAAAAAGAGATTGCAAGCAAAGAAAAAAAATCTCTTACTACCATAGATGAGTTTACAGTTGAGCATCCATGGAAAGATGATAAACCAAAACAGCACATATATGACCGTGTGTTTGATGGTGATGCCACTCAAGAAGAAGTATTTGAGGATACAAGGTACTTGGTGCAATCAGCTGTAGATGGTTATAATGTTTGCATATTTGCTTACGGCCAAACTGGCTCTGGAAAGACTTTTACAATCTATGGAGCTGAAAACAATCCTGGGCTTACCCCTCGTGCCACTTCAGAACTTTTTAGAATTTTAAGGAGAGATAGTAACAAGTATACTTTTACCTTGAAGGCATATATGTTGGAATTATATCAAGATACTCTTGTAGATCTTCTGTTACCTAGGAATGCAAAGCGTTTAAAATTGGATATTAAGAAGGATTCAAAGGGAATGGTAGCAGTAGAAAACGTAACAGTTGTGTCAATTTCGACTGTGGAGGAATTAAATAGCATAATACAAAGGGGATCTGAGCAGCGACATACATCAGGGACACAAATGAATGACGAAAGCTCAAGATCTCATCTCATACTTTCAATTGTCATTGAAAGTACCAACCTTCAAAGCCAATCAACTGCAAGAGGAAAGTTAAGTTTTGTGGATCTTGCTGGCTCAGAAAGAATAAAAAAGTCAGGCTCTGCAGGCAGTCAACTTAAAGAAGCTCAAAGTATCAACAAATCATTATCAGCACTAGGAGATGTTATCAGTGCTTTGTCTTCTGGTGGTCAACACATACCTTACAGAAATCACAAGTTAACTATGTTGATGAGTGATTCACTTGGGGGTAATGCCAAAACTCTCATGTTTGTGAATGTGTCTCCAGCAGAATCAAGCTTGGATGAGACACATAACTCTCTAATGTATGCATCACGAGTGAGATCAATTGTGAACGATCCAAGCAAAAATGTTTCTTCTAAAGAGATAGCTCGGCTGAAGAAATTGGTTGCATATTGGAAGGAGCAAGCAGGTAGGAGAGGAGAGGATGAAGATTTGGAAGAAATCCAAGAAGAAAGACCAACAAAAGAGAGGACTGATGGCAGGCATTCTATGTAA 3810 0.3882 MTIDVPLSGVQSMRTNRSSFSSSNGNEATPLHNYASVSNSDGYDSDGSNFAPPTPTTLSMAIPEELAGAVPLIDRFQVEGFLKLMHKQIQSAGKRGFFSKRSVGPQVREKFTFEDMLCFQKDPIPTSLLKLNGDLASRATKLFQIILKYIGVDSSDRVTPISLDERVELVGKLYKQSLKRSELRDELFVQISKQTRNNPERECLTKAWELMFLCASSMPPSKDIGAYLSEYVHNVAHGVTTDPEIRALALNTLNALKHSVKAGPRHIIPGPIEIEALLTGKKLTTIVFFLDETFEEITYDMSTTVADAVQELAGIIKLSTYSSFSMFECRKVVTGSKSPDSGNEEYIGLDDNKYIGDLLAEFKAVKDRSKGEILQCKLIFKKKLFRESDEAVTDPMFLQLSYVQLQHDYIMGNYPIGRDDAAQLSALQILAEIGFVRRPESCTDWNSFLEQFLPRQIAMTRAKREWELDILSCYHSLAHVTKDDARQQFLHVLRTLPYGFSVFFNVRKIDDPIGLLPGRIILGINKRGVHFFRPIPKEYMHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAAGDSLSEDISNNFKPSNLESYEKRVQDLSKLVEESQRNADQLLVKLREKQKQEDEMLQELEGLKESLKADKQSLAEVTNDRDKLRSLCDEKDKALQAKILEKRNMEAKVTKLSNLVTENTAKKDPILANNQVSQKLEDDLKLCKGELLVAEETIKSLRSEKFILEQKLSELEKKSAEEISSRQLKLEQERKTLNSQVYDLERKLDVLRQELTVAESTLSVKDSELAALKNNLDELEELREMKEDIDRKNEQTAAILKMQAAQLTEMELLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLSEKEIASKEKKSLTTIDEFTVEHPWKDDKPKQHIYDRVFDGDATQEEVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGAENNPGLTPRATSELFRILRRDSNKYTFTLKAYMLELYQDTLVDLLLPRNAKRLKLDIKKDSKGMVAVENVTVVSISTVEELNSIIQRGSEQRHTSGTQMNDESSRSHLILSIVIESTNLQSQSTARGKLSFVDLAGSERIKKSGSAGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESSLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKEQAGRRGEDEDLEEIQEERPTKERTDGRHSM 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01145 1269 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Cca06g01145 1269 Gene3D MyTH4 domain 98 279 IPR038185 -
Cca06g01145 1269 Pfam FERM central domain 389 503 IPR019748 -
Cca06g01145 1269 PANTHER KINESIN-RELATED 615 1265 IPR027640 GO:0003777|GO:0007018
Cca06g01145 1269 Coils Coil 621 683 - -
Cca06g01145 1269 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
Cca06g01145 1269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 893 1242 IPR027417 -
Cca06g01145 1269 Gene3D - 501 609 IPR011993 -
Cca06g01145 1269 PRINTS Kinesin heavy chain signature 965 986 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g01145 1269 PRINTS Kinesin heavy chain signature 1084 1101 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g01145 1269 PRINTS Kinesin heavy chain signature 1115 1133 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g01145 1269 PRINTS Kinesin heavy chain signature 1164 1185 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g01145 1269 Gene3D - 282 385 - -
Cca06g01145 1269 SUPERFAMILY PH domain-like 503 591 - -
Cca06g01145 1269 Gene3D - 386 497 IPR014352 -
Cca06g01145 1269 SMART kinesin_4 891 1222 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g01145 1269 MobiDBLite consensus disorder prediction 13 56 - -
Cca06g01145 1269 CDD FERM_B-lobe 398 496 IPR019748 -
Cca06g01145 1269 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Cca06g01145 1269 CDD KISc_C_terminal 891 1216 - -
Cca06g01145 1269 Coils Coil 757 777 - -
Cca06g01145 1269 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 615 1265 - -
Cca06g01145 1269 SUPERFAMILY Prismane protein-like 836 897 IPR011254 GO:0003824|GO:0016491
Cca06g01145 1269 SUPERFAMILY Second domain of FERM 381 498 IPR035963 -
Cca06g01145 1269 SMART B41_5 279 503 IPR019749 -
Cca06g01145 1269 ProSiteProfiles Kinesin motor domain profile. 893 1214 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g01145 1269 ProSiteProfiles FERM domain profile. 283 597 IPR000299 GO:0005856
Cca06g01145 1269 Coils Coil 779 858 - -
Cca06g01145 1269 CDD FERM_C_KCBP 501 604 - -
Cca06g01145 1269 ProSitePatterns Kinesin motor domain signature. 1114 1125 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca06g01145 1269 Gene3D - 1217 1265 - -
Cca06g01145 1269 Gene3D Kinesin motor domain 880 1216 IPR036961 -
Cca06g01145 1269 Pfam Kinesin motor domain 899 1214 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g01145 1269 MobiDBLite consensus disorder prediction 1240 1269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01145 Cca-Chr6 25716329 25726409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01145 28 1264 Calmodulin-binding Proteins AT5G65930 72.676 0.0 1841
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01145 06 25716329 25726409 Cca06g01145 06 25716329 25726409 ECH