Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01139 ATGCCCCCCAAAGACATGGTCTTTGCCAGAATCGCATCATTCCCCAACAGCCTCCGCATCTCCTCCTCCCTCCAGGATCTCTCCTCCTAccgccacctcgccaccgccgccgccgcaccccaacccaacacaacctccTCACGCAAAAAATGCCTCAGATTCTCACTCTACCTCGCTTCCTTACTCTTCCTAACCTACCTCTTCTTCCTCCTCTATTCCTACTGGAACCACGGTTCCGGCAACTACTACGTTGTCCTGGATTGCGGCAGCACCAGCACGCGCGTCCACGTCTACCACGCCTCCGTTCGCTTCACGCGCCATAGCAGTCTCCCATTACAAGTCGCCTCTCTCAGGAACACCTTGCGCAAGAAGCCTAGTGGCCGCGCCTACGATCGCATGGAAACCGAACCTGGTCTCGACAAATTGGTTCACAATGTCTCCGGTTTGAGAACCGCTTTGAAACCGTTGCTTCGGTGGGCCAAAAAGCAGATACCACTGCACTCTCACAAGTCCACTTCGTTGTTCCTTTATGCCACTGCTGGCGTGAGGAGGCTTCCCTTTGGGGACTCTCAGTGGCTGCTTGAGAATGCTTGGAATGTGCTAAAGGACTCTCCTTTTGTGTGTCAGAGGGATTGGGTTAAGATCATCTCTGGCCCTGAGGAGGCTTATTTTGGCTGGATTGCTCTTAATTATGATAGTGGCATTTTGGGGGTTAGGCCTAGGAAGGCTACTTATGGTGCCCTTGACTTGGGGGGTTCCTCGTTGCAGGTCACGTTTGAGAGTGATCAGCAGATGAATAGTGAGACTAGTTTGTATGTTAGGATTGGGTCTGTGAGCCATCACCTCACTGCGTATTCGCTCGCGGGGTATGGACTCAATGAGGCGTTTGGTAAGTCTGTGGTGTATCTCTTTAGGAAGGAGTTTGGATTGGTTGGTGTAGATGTAGGTAGTAGGAAGGTAGAGTTGAAGCATCCTTGCTTGCAGGATGGGTATAGGGAGGAGTACTTTTGTTCTCGTTGTTCGGGTAATGCCAAAGGTGGGAATGGGAAAGAGTTGGGTAGGAATGGAGGGTTGGGAACTTCATTAGTGCTTCTTGGTGCTCCTAATTGGGAGGAATGTAGTGCGCTTGCGAAGGTTGCTGTGAATTTCTCTGAATGGTCTGATCTTGGTGGTGTGGGGCTTGATTGTGGTGCGCAGCCTTGCGCTCTGCGTGAAAATCTGCCTCGCCCGTATGGGCATTTTTATGTGATTTCTGGATTTTATGTGGTGTATAGGTTTTTCAACTTGACTTCTGAGGCTATGCTTGATGATGTGTTGGCAAAGGGTAAGGAGTTTTGTGGAAAGAGATGGGATGTTGCGAAGAAAAGTGTTGCTCCGCAACCCTTTATTGAGCAGTACTGCTTCAGGGCACCCTACATTGCCTCTTTGCTGAGGGAGGGTTTGCACATTAATGATAACCAAATAACTGTTGGGTCTGGAAATATCACTTGGACACTTGGGGTTGCCCTTTTGGAAGCTGGAAAGGCATTTTCCACTAGATTTGGGTTTCGTGACTTGGAGTTTTTCCAGATGAAGATAAATCCCCTTGTTCTTGTGCCCATTTTGTTGCTTTCTTTTATACTCCTTCTTTGTGCTTTATCATGTATTGGCAATTGGATGCCAAGGTTTTTCCGGAGGCCATTTCTTCCCATTTCCAGGCATAACAGTGTTTCTGGTGCTTCTGTCCTTAATATACCATCTCCTTTTCGGTTCCAGCGATGGAGTCCAATTAACTCTGGGGATGGAAGATTAAAGATGCCACTCAGCCCAACAGTTGCAGGTTCACAACATAGCCCGTTTGGTCTAGGGCATGGGCTTGATGACAACAGTGGTGGCATCCAGCTTATGGAGTCTTCATTGTACCCATCAACTAGTAATGTCTCACATAGTTATTCCTCAAACAGTTTAGGACAAATGCGTCTACAGAGTAGGAGATCACAGTCTCGAGAAGACCTGAATTCCTCATTGGCTGAAGCTCATCTGGTGAAGGTTTAG 2034 0.4705 MPPKDMVFARIASFPNSLRISSSLQDLSSYRHLATAAAAPQPNTTSSRKKCLRFSLYLASLLFLTYLFFLLYSYWNHGSGNYYVVLDCGSTSTRVHVYHASVRFTRHSSLPLQVASLRNTLRKKPSGRAYDRMETEPGLDKLVHNVSGLRTALKPLLRWAKKQIPLHSHKSTSLFLYATAGVRRLPFGDSQWLLENAWNVLKDSPFVCQRDWVKIISGPEEAYFGWIALNYDSGILGVRPRKATYGALDLGGSSLQVTFESDQQMNSETSLYVRIGSVSHHLTAYSLAGYGLNEAFGKSVVYLFRKEFGLVGVDVGSRKVELKHPCLQDGYREEYFCSRCSGNAKGGNGKELGRNGGLGTSLVLLGAPNWEECSALAKVAVNFSEWSDLGGVGLDCGAQPCALRENLPRPYGHFYVISGFYVVYRFFNLTSEAMLDDVLAKGKEFCGKRWDVAKKSVAPQPFIEQYCFRAPYIASLLREGLHINDNQITVGSGNITWTLGVALLEAGKAFSTRFGFRDLEFFQMKINPLVLVPILLLSFILLLCALSCIGNWMPRFFRRPFLPISRHNSVSGASVLNIPSPFRFQRWSPINSGDGRLKMPLSPTVAGSQHSPFGLGHGLDDNSGGIQLMESSLYPSTSNVSHSYSSNSLGQMRLQSRRSQSREDLNSSLAEAHLVKV 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01139 677 Gene3D - 74 216 - -
Cca06g01139 677 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 40 661 - -
Cca06g01139 677 Gene3D Exopolyphosphatase. Domain 2 217 492 - -
Cca06g01139 677 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 40 661 IPR000407 GO:0016787
Cca06g01139 677 Pfam GDA1/CD39 (nucleoside phosphatase) family 79 504 IPR000407 GO:0016787
Cca06g01139 677 MobiDBLite consensus disorder prediction 637 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01139 Cca-Chr6 25670616 25674501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01139 16 677 Nodulin-like Gene Family AT4G19180 55.745 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01139 - - gmx:100787212 1029.24