Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01138 ATGGCAGCATCAGTGGGAGTGGGGGGTGAGATATGGAAGGCCCATTTGGCGATGGCGTTGGTTCAGCTATTCAATGGTGGCTACCATGTCATCACCAAAGTTGCCCTTAACGTTGGCGTCAACCAATTAGTCTTCTGTGTCTTTCGAGATCTCCTTGCCCTTTCAATCCTCGCACCCCTTGCTTATGTCCGTGAAAAACGGATTCGACCACCCACTACAAAGAAAATCCTGATGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTCTTGTTTCTGATTGGTTTAAGCTATACTAATCCAACTTATGCTGCTGCCATACAGCCATCCATTCCGGTCTTTACCTTTTTGTTGGCTGTAATGATGGGTACAGAAAGAGTGAACTTACTCAGATACGATGGTCTGGCAAAAGTTGGAGGAACTATTATCTGTGTTTCTGGTGCCATATTCATGGTTTTATATCGTGGTCCAGCTTTGATAGGATATGCAGAACTTGATCACGCAATACAAAATGAAATAAGTGCCAGAGGTCAGCCAGAACCATCTGGATGGTTAATTGGTGGTTTACAGGATCTTGGCTTAGACCATTTTCATGTTGGAGTTTTATGCTTGATAGGGAACTGCATTTGCATGGCTGCTTTTCTAGCCATTCAGGCACCAGTATTAAAAAAATATCCTGCAAACCTAACCGTCACTGCATGTTCATACTTCTTCGGAGCTTCTCTGATGGTGACATTGTCATTGTTCATGACGAATGAATCAACAGACTGGAGTTTGACGCATTCAGAAATACTTGCCGTTATTTATGCTGGAACTGTTGCATCTGCCCTTAACTATGGACTCATTACATGGTGCAACAAGATCTTGGGGCCAGCTATGGTTGCCCTTTACAATCCGCTTCAACCTGCGTTCTCTGCTATCCTGTCCCAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGCATCATAGGCGGATCTTTTATCATCGCCGGTCTATATATGGTTACTTGGGCATCTTATAGAGAAAGACAAGCAACTCTTGTTGTTGCTTCTCATGGCTCTTGGGTCGCTGAACCACTTGTGCATGAAAGAAGTCCACGCCAGAGAGGTTAA 1122 0.4385 MAASVGVGGEIWKAHLAMALVQLFNGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPLAYVREKRIRPPTTKKILMSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLRYDGLAKVGGTIICVSGAIFMVLYRGPALIGYAELDHAIQNEISARGQPEPSGWLIGGLQDLGLDHFHVGVLCLIGNCICMAAFLAIQAPVLKKYPANLTVTACSYFFGASLMVTLSLFMTNESTDWSLTHSEILAVIYAGTVASALNYGLITWCNKILGPAMVALYNPLQPAFSAILSQIFLGSPIYLGSIIGGSFIIAGLYMVTWASYRERQATLVVASHGSWVAEPLVHERSPRQRG 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01138 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 154 - -
Cca06g01138 373 PANTHER WAT1-RELATED PROTEIN 12 373 - -
Cca06g01138 373 Pfam EamA-like transporter family 14 154 IPR000620 GO:0016020|GO:0016021
Cca06g01138 373 Pfam EamA-like transporter family 202 339 IPR000620 GO:0016020|GO:0016021
Cca06g01138 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 344 - -
Cca06g01138 373 PANTHER WAT1-RELATED PROTEIN 12 373 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01138 Cca-Chr6 25662956 25668488 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01138 97 368 Nodulin-like Gene Family AT5G45370 64.855 3.56e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01138 - - gmx:100787738 667.151