Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01137 ATGGCAGAATCAATGGGGGGTGGTGACACATTGAAGGCCCACGTGGGCATGGCACTGGTGCAGCTATTCTTTGGTGGCTACCAAGTCCTCACCAAAGTGGCCCTTAATGTTGGGGTCAACCAACTTGTTTTCTGCTTCTACAGGGTTTCCCTTGCCTTCATTATTCTTGCTCCCATCGCTTTTTTTCTTGAAAGACGGACTAGACCACCCATTACCAAGAAGTTACTGTTGTCATTCTTTTTCCTTGGATTGACCGGGATATTTGGCAACCAGCTCTTGTTTCTTATTGGTTTAAATTATACTAATCCGACTTATGCTGCTGCTGTACAGCCAGCCGTTCCAGTCTTTACATTTCTGTTTACTGTAATTATGGGGATAGAAAGAGTGAACTTGCTCAGATATGAAGGTCTGGCAAAGGTTGGAGGAACTATTGTCTGTGTTTCTGGTGCCATATTGATGGTTTTTTATCGTGGTCCAGCTTTGATAGGAGATGAAGAAATGGAGAATGTTGCACAAATTAAAATAAGTGCTAGAGGTCAGCAAGAGGCTTCTGGATGGTTAATCAATAGTTTACACAATCTTGGATTAGACAATTTTCAACTTGGGGTTATATTCTTGATAGGGAACACCTGCTGCATGGCTGCTTTTCTAGCCATTCAGGCGCCAGTATTAAAAAAGTATCCTGCAAACTTGTCTGTCACAGCATATTCATTCTTCTTTGGAGTTGTACTAATGGTGATCGCATCATTATTCATGGTTCATGAGTCAAGTGATTGGATTTTGACGCAATCAGAAATACTAGCCATTGTATATGCTGGAACTATTGCATCTGCCCTTAACTATGCAATCGTTTCATGGAGCAATAAGATCTTGGGGCCAGCTATGGTTTCCCTTTACAAACCGCTTCAACCTGTGTTTTCTTCCCTTCTCTCCCAAATTTTCCTTGGCACTCCAATTTACTTGGGAAGCATCATAGGGGGATCTTTAATCATTGCTGGTCTGTACATAGTTACTTGGGCATCTTATAGAGAAAAACAGGCAACTTTGGGAGTTACTCCTCATGCCTCTTCTGTCTCTGAACCACTTATTCATGAAAAAAGTTCAGACCAGGGAGGTCACATTTCTTCGGGGTCCTCCAGCATATCCTGA 1149 0.423 MAESMGGGDTLKAHVGMALVQLFFGGYQVLTKVALNVGVNQLVFCFYRVSLAFIILAPIAFFLERRTRPPITKKLLLSFFFLGLTGIFGNQLLFLIGLNYTNPTYAAAVQPAVPVFTFLFTVIMGIERVNLLRYEGLAKVGGTIVCVSGAILMVFYRGPALIGDEEMENVAQIKISARGQQEASGWLINSLHNLGLDNFQLGVIFLIGNTCCMAAFLAIQAPVLKKYPANLSVTAYSFFFGVVLMVIASLFMVHESSDWILTQSEILAIVYAGTIASALNYAIVSWSNKILGPAMVSLYKPLQPVFSSLLSQIFLGTPIYLGSIIGGSLIIAGLYIVTWASYREKQATLGVTPHASSVSEPLIHEKSSDQGGHISSGSSSIS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01137 382 PANTHER NODULIN MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN 12 377 - -
Cca06g01137 382 MobiDBLite consensus disorder prediction 363 382 - -
Cca06g01137 382 PANTHER WAT1-RELATED PROTEIN 12 377 IPR030184 GO:0016021|GO:0022857
Cca06g01137 382 Pfam EamA-like transporter family 15 139 IPR000620 GO:0016020|GO:0016021
Cca06g01137 382 Pfam EamA-like transporter family 201 338 IPR000620 GO:0016020|GO:0016021
Cca06g01137 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 153 - -
Cca06g01137 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01137 Cca-Chr6 25633181 25647953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01137 96 370 Nodulin-like Gene Family AT5G45370 59.140 2.88e-118 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01137 - - ccaj:109800172 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01137 06 25633181 25647953 Cca06g01137 06 25633181 25647953 ECH