Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01126 ATGGAACTAAGCACCATGTTTTGCTTGTGTGCTTCTTTTCTCTTCATTGTCCTCTTCAGAACACTCATCAAATCCAAACGCCGTGGTGACTTGCCACTCCCTCCTGGCTCCATGGGTTGGCCTTACATAGGAGAAACCTTTCAAATGTACTCTCAAGACCCAAATGTCTTCTTCACCTCAAAAATTAAAAGGTATGGCTCCATGTTCAAGTCCCACATTCTAGGTTGTCCCTGCGTGATGATTTCCAGCCCTGAGGCTGCCAAGTTTGTGCTCAACAAAGCTCAACTCTTCAAGCCAACATTCCCAGCAAGCAAAGAGAGGATGTTGGGAAAACAAGCCATTTTCTTTCACCAAGGAGAGTACCATGCTAACTTGAGAAGGCTCGTTCTTCGCACCTTCATGCCAGAGGCCATAAGAAACATCGTACCCGACATTGAATCCATTGCCCAAGCTTGCCTCAAATCATGGGAGGGTCGTTTGATCACCACTTTCCTTGAAATGAAAACGTTCACTTTCAACGTTGCTCTGCTTTCGATTTTCGGGAAAGAGGAAATTCTGTACAGAGAGGCTCTGAAACGGTGCTACTACACTCTGGAGCAAGGGTACAATTCAATGCCGATTAACGTGCCGGGAACGCTGTTCCACAAGGCGATGAAGGCAAGAAAGGAGCTTGCGCAGATCGTGGCCCAAATAATCTCTAGCAGGAGGCAGAGGAAGCAAGATTACAAGGACTTGTTGGGTTCGTTCATGGGTGAGAAAGCAGGGCTCACCGACGAGCAGATAGCAGATAATGTAATTGGAGTCATATTTGCAGCTCGTGACACCACGGCCAGTGTGCTGACGTGGATAGTCAAGTACCTTGGCGAAAACCCTAGTGTCCTAGAAGCTGTTACTGAAGAACAAGAGTGCATATTGAAGAGCAAGGAAGAAAGTGGAGAAGATAAGGGTCTTAATTGGGAGGATGCCAAAAAGATGCCAATAACTTCAAGGGTTATTCAGGAGACTCTCAGAGTGGCTTCAATTTTGTCTTTTACCTTCAGAGAGGCAATAGAGGATGTTGAATATCAAGGTCAATAA 1077 0.4596 MELSTMFCLCASFLFIVLFRTLIKSKRRGDLPLPPGSMGWPYIGETFQMYSQDPNVFFTSKIKRYGSMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTFMPEAIRNIVPDIESIAQACLKSWEGRLITTFLEMKTFTFNVALLSIFGKEEILYREALKRCYYTLEQGYNSMPINVPGTLFHKAMKARKELAQIVAQIISSRRQRKQDYKDLLGSFMGEKAGLTDEQIADNVIGVIFAARDTTASVLTWIVKYLGENPSVLEAVTEEQECILKSKEESGEDKGLNWEDAKKMPITSRVIQETLRVASILSFTFREAIEDVEYQGQ 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01126 358 PRINTS E-class P450 group I signature 329 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01126 358 PRINTS E-class P450 group I signature 280 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01126 358 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01126 358 PRINTS E-class P450 group I signature 260 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01126 358 SUPERFAMILY Cytochrome P450 29 357 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01126 358 PANTHER CYTOCHROME P450 26 13 357 - -
Cca06g01126 358 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 13 357 - -
Cca06g01126 358 Gene3D Cytochrome P450 22 358 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01126 358 Pfam Cytochrome P450 34 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01126 Cca-Chr6 25490177 25493361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01126 1 357 Cytochrome P450 AT4G19230 74.515 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01126 K09843 - gmx:100170674 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01126 06 25490177 25493361 Cca06g01126 06 25490177 25493361 ECH