Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01112 ATGTTCTACAAAAAGAGTGCAGTTATGGAAGGAAAACACCCTGCAACAGTTATAAGACATGGTTTGGGTGAAGCACTTGTGCACTACTACCCACTTGCAGGTAGGTTGAGAGAAGGGCATAACAGAAAGCTAATGGTGGATTGCAGTGGTGAGGGCATCTTGTTTATTGAAGCTGAGGCTCATGTTTCTCTCCACCAGCTTGGGGGTTCCATTCTCAAAGACCTTCTTCTTCACGTTCCTGGATCACAACAAATCATTCCATGCCCTCTGCTGCTGCTTCAGGTAAAGCACCACGTCTCAGACCTTCAAAAATTGATAAACTGA 324 0.4506 MFYKKSAVMEGKHPATVIRHGLGEALVHYYPLAGRLREGHNRKLMVDCSGEGILFIEAEAHVSLHQLGGSILKDLLLHVPGSQQIIPCPLLLLQVKHHVSDLQKLIN 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01112 107 Gene3D - 1 100 IPR023213 -
Cca06g01112 107 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 95 - -
Cca06g01112 107 Pfam Transferase family 2 95 - -
Cca06g01112 107 PANTHER LOW QUALITY PROTEIN: METHANOL O-ANTHRANILOYLTRANSFERASE-LIKE 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01112 Cca-Chr6 25257856 25258179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01112 2 101 Monolignol Biosynthesis Gene Families AT5G48930 30.508 3.23e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01112 - K19861 ccaj:109815794 193.356