Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01104 ATGCGGATGCTATATAAGTTTGGAATTCCATGCGACACAGAAGGCCACGTAGAGGAAGACGCAAGCAAAGAGAGAAAGCGATCCCTATTCCCTATGGCGGGGCAATCTCGGAAGTGGATGATCTTGGTTGCCACCATATGGATTCAGGCCTTCACCGGCACCAACTTCGATTTCTCCGACTACTCCTCCTCCCTCAAATCCTCCCTCAACATCTCCCAGGTGCAGCTCAACTACCTCGCCACCGCCAGCGACATCGGCAAGCTCTTCGGCTGGTCCTCCGGCCTCGCCCTCATGTACTTTCCCCTCTCTCTCGTTCTCCTCGTTGCTTCCTTCATGGGCCTCGTCGGTTACGGCCTCCAGTGGCTCGCCATCCAGGACATCATCACCCTGCCCTATCCTATGTTCTTTCTTCTGTGTCTGTTGAGTGGCTGTAGCATCTGTTGGTTCAACACAGTGTGTTTTGTTCTCTGCATTAGGAATTTCCCGGTTAACAGACCCCTTGCATTATCACTCACAGTGAGTTTCAATGGTGTGAGTGCAGCACTCTACACACTGGCTGCCAATTCAATAGACCCTTCATCTGATACACTGTATCTTCTCTTGAATGCCCTTGTTCCCCTTCTCACTTCCCTTGTAGCACTAGTCCCAATTCTTCTCCAACCCCCTTTAAACTCCCTCTCTAGATCTCCAGAGGCTGCTCGCAGAAACTCAGTGATATTTCTCATACTCAACTTCTTAGCCATTTTCACTGGCACTTACCTCCTCCTCTTTGCCTCATCAAATTCTGATGAAGCCACATCGAGACTCTACTTTGGTGGTGCCATTTTTCTCCTCGTATCCCCACTATGTATCCCTGGTACCATATATGCTCGAGACTGGTTTCACCAAGCCATCCATTACAGCTTTCGGTTGGAAGGCTCTGGCTTCATTCTTGTTCATGTTGATGATCTTGAGCTTCATAAGGAACTCCTCACCCGTCAAAGCAGTGCTCTCAGCAATGGAGATGGTCACAGCCTACTAGGTGAGAATGAATCAATGTATGGAAGTCAGAGGGCAAAATCTAGCAATGTTGGTTGTGAGAAGATGCTAGGTCAGGATCAGTTGGTAATGCTAGGAGAAGAGCACCCTGCTGCAGTGGTTGTCAAAAGGTTGGATTTCTGGCTCTATTATGTTGCATACTTCTGCGGAGGCACAATTGGTCTTGTCTACAGCAATAATCTAGGACAGATAGCTCAATCTTTAGGCCAGAGTTCAAGTATATCTACCCTTGTCACACTATACTCCGCATTTTCCTTCTTTGGCCGTTTGCTTTCAGCTGTACCAGACTATATTCGGAATAAGTTCTACTTTGCAAGGACCGGATGGCTAGCCATTGCGCTGGTTCCAACCCCAGTTGCGTTTATAGTTCTTGCTGCATCAGACAGTGCTGCAGCACTTAACACAGGCACTGCACTGATTGGTTTGAGTTCTGGTTTCATATTTGCGGCTGCTGTGGCAGTTACATCTGAGCTATTTGGACCCAACAGTGTGAGCGTCAATCACAACATTCTCATAACAAACATCCCAATTGGGTCGCTTCTGTATGGTTTTCTGGCTGCATTGGTTTATGATATGCATGCTCAGTCAACCTCGGGAGACATGATGGCTGACTCACTGGTGTGCATGGGAAGGAAGTGCTATTTCTGGACATTTGTCTGGTGGGGAGGAGTGTCTGTCGTAGGACTAGCTTCTAGTGTGTTGTTGTTCCTAAGAACCAAATACGCATATGATCATTTTGAGAGACACAGAATTTCAGCATCGAGTCTGTCTTAG 1812 0.4774 MRMLYKFGIPCDTEGHVEEDASKERKRSLFPMAGQSRKWMILVATIWIQAFTGTNFDFSDYSSSLKSSLNISQVQLNYLATASDIGKLFGWSSGLALMYFPLSLVLLVASFMGLVGYGLQWLAIQDIITLPYPMFFLLCLLSGCSICWFNTVCFVLCIRNFPVNRPLALSLTVSFNGVSAALYTLAANSIDPSSDTLYLLLNALVPLLTSLVALVPILLQPPLNSLSRSPEAARRNSVIFLILNFLAIFTGTYLLLFASSNSDEATSRLYFGGAIFLLVSPLCIPGTIYARDWFHQAIHYSFRLEGSGFILVHVDDLELHKELLTRQSSALSNGDGHSLLGENESMYGSQRAKSSNVGCEKMLGQDQLVMLGEEHPAAVVVKRLDFWLYYVAYFCGGTIGLVYSNNLGQIAQSLGQSSSISTLVTLYSAFSFFGRLLSAVPDYIRNKFYFARTGWLAIALVPTPVAFIVLAASDSAAALNTGTALIGLSSGFIFAAAVAVTSELFGPNSVSVNHNILITNIPIGSLLYGFLAALVYDMHAQSTSGDMMADSLVCMGRKCYFWTFVWWGGVSVVGLASSVLLFLRTKYAYDHFERHRISASSLS 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01104 603 PANTHER NODULIN-LIKE/MFS TRANSPORTER 22 601 - -
Cca06g01104 603 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 22 601 - -
Cca06g01104 603 SUPERFAMILY MFS general substrate transporter 31 586 IPR036259 -
Cca06g01104 603 Pfam Nodulin-like 38 285 IPR010658 -
Cca06g01104 603 Gene3D MFS general substrate transporter like domains 385 600 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01104 Cca-Chr6 25112840 25117304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01104 18 601 Nodulin-like Gene Family AT1G31470 56.463 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01104 - - gmx:100814771 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01104 06 25112840 25117304 Cca06g01104 06 25112840 25117304 ECH