Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01098 ATGGCATTGTGGTTCTATATTCTTGCAACCATTTGTCTATGTATATCTTTTCAAGCACTTCTCAAAGTAAACCGCAACAAAAGGTTACCACCAAGCCCTCCTACCATACCCATCATAGGTAACATATTTTGGCTCCTTAAGTCATCAAAAAATTTTGCTGATCTTGAACCCGTTCTTCGCTCTCTACGTTCCAAGTACGGTAACATTGTTACCATCCACATTGGATCTACCCCTTCAATTTTCATAACATGTCATGAAGCTGCTCATAGAGCACTTGTTAAAAATGGCACTGTATTTGCTGGTCGTCCTTTGGCTCTTAAAACCACCCAAGTTTTCTTCCCTAACCAATACACTGTTACTACTTCTCCATATGGCTCCAATTGGCGAATGTTGCGCCAAAACTTAATGCAAATAATTCAACCTTCTAAGTTAAAGTTATATTCTCATTGTCGTAAGTGGGCATTTGATGTATTAAAGAAACATATTTTAGATGAAATTGAGTCGGGCAATAAGGAGATTACAATTAATGGTTATTTGAATTACACATTGTATGCTTTATTTTCATATATATGTTTTGGAGAGAAATTTGATGAGAAAACCATTAGGGATATTCAAAGGGTACAACACGGTTTTGTTCACAATTTCATTAGGTTCAACGTGCTGAATTTCGTGCCACTCTTGTCTAAGATTGTGTTTAGAAGACTGTGGAGAGAGATCTTGGAAATTCGTGAAAATCAGGTGAATGTGTTACTCCCTATCATAAAAGCACGCCACGAGAAAATGAATAGCAAGGTTGGTATTGAAGATGACAATGAAGAAGAGTTCAAGGCTTATGTGGATACCCTTTTTGATATGAAGCTTCCAAGCAATGGAAGCAAGCTAACGGATGAAGAGTTGGTGAGTGTGTGTGCTGAGTTTATGTTAGGTGGCACGGATACAACAGTTACCACTTGGGAATGGACCATGGCGAATTTGGTGAAGTACCAACACATACAAGAGAAACTGTTTGAGGAAATTAAGGAAGTTGTGAAACCTGATGAAGACATTGAGGAGGAACATTTGAAGAGGATGCCTTATTTAAAGGCTGTAGTGTTAGAGACTTTAAGGAGACACCCTCCGGGGCATTTTATATTGCCTAGGGCAGTTACACAGGACATTGTTATGGATGGTTATCATATACCAAAAAATGCAATTGTGAATTTTCTTGTAGCAGAATTTGGGTGGGATCCAAATGTGTGGGAAGATCCTATGGAGTTTAAGCCTGAGAGGTTTTTGAGGCATGACGAAGGTGATGCTAAGTTTGATCTGAAAGGGACTACAGATATTAAAATGATGCCTTTTGGTGCAGGAAGGAGAGTTTGTCCTGCAATTAGTATGGCAACTCTTCACCTTGAGTATTTTGTGGCCAATTTGGTGAGGGATTTTAAGTGGACACTTGAAGAGGGGTGTGAGGTTGACATGAGTGAGAAGCAGGTCTTCACTATTGTGATGAAGAATCCTTTGAGGCCATGTGTGTCTCCAAGAATTAATCACTTAAAGACAAAGGTTCCCATCCCAAGTGACTGCATAATCTTAACTTGCAGAACTATTATTTCTGCCAATCCATCCTTGATATGGGTGTTATGGAGCAAGATGAGGGACATCAAGATCAAGCATTTTGATAACAATGTTAAGAAGGTCTTTGTCTCTTGTCAATCAGCTCAACCTGCATTTCTCTCACTCTCGCATCTCAGATCGAAATCCAGGCAGTGTCCACGTTTGTCTGCGCTTGTTGCTATGGGCATTTGTCTTTTGAAATGGCAATGGCCGTGGCTTCTTTGTATTCTGCTAATACGCGTTGTAATCAATGAAAGCGAAGCGATCAGTCCCGATGGTGAGGTGCTTCTGAGCTTTAAGACAGCAGTTGTTAGTTCTGATGGTATCCTGTTACAATGGAGGCCAGAGGATCCTGACCCATGTAAATGGAAAGGAGTGAAATGTGATCCGAAAACAAAGAGAGTAACACACCTGAGTCTATCGCACCATAAATTAAGTGGGTCTGTATCACCTGACCTTGGGAAGCTAGAGAATCTGAGGGTTCTTGCTCTTCATAACAACAACTTCTATGGGACAATTCCATCAGAATTGGGAAATTGCACTGAATTGGAGGGAATATTTTTACAGGGTAATTACCTTAGTGGAGTGATTCCAAGTGAAATAGGAAACCTTTCACAGCTTCAAAATTTGGATATATCAAGCAATTCCCTCAGTGGGAATATTCCTGCATCGCTTGGGAAGTTGTATAATCTCAAAAATTTCAATGTATCAACCAATTTTCTGGTCGGACCTATACCTTCTGATGGTGTCCTTGCCAACTTTACTGGAAGCTCCTTTGTTGGAAATCGGGGTTTGTGTGGAGTGAAAATCAATTCAACATGTAAAGCTGATGGTTCACCCGAGACAAATGGATCTACTTTGTCAGACCAAAATCAAATTGGGAAGAGGAAATATTCTGGCCGGCTGCTCATCAGTGCATCAGCAACTGTGGGAGCACTACTTTTGGTGGCACTTATGTGCTTCTGGGGTTGTTTTCTTTATAAGAAGTTTGGTAAAAATGACAGAATAAGTCTGGCTATGGATGTTGGTGCAGGTGCATCAATTGTGATGTTTCATGGAGACCTACCATATTCTTCAAAAGACATCATTAAGAAACTAGAAACTTTGAATGAGGAACATATAATAGGGATAGGGGGATTTGGAACTGTATACAAGCTTGCAATGGATGACGGGAATGTATTTGCTTTGAAAAGGATTGTAAAGTTGAATGAGGGATTTGATCGTTTTTTTGAGAGAGAGCTTGAAATTCTTGGTAGCATCAAACACCGTTATCTAGTGAATTTACGAGGATATTGCAATTCACCCACATCAAAGTTGTTAATATATGATTACCTACCTGGTGGGAGTCTTGACGAAGCTCTTCATGAAAGATCTGAGCAATTAGACTGGGATTCACGCTTGAATataatcatgggagctgcaaaagggcttgcctacttgcaccatgattgttcccctaggatcatacaccgagacataaaatcaagcaacattttgcttgatgGAAACTTGGAAGCTCGGGTCTCTGATTTTGGACTTGCCAAACTGCTGGAGGATGAAGAATCTCACATCACCACTATTGTTGCTGGAACGTTTGGTTATCTAGCTCCAGAATATATGCAAAGTGGCAGAGCAACTGAGAAGAGTGACGTGTACAGCTTTGGTGTGCTGACACTTGAAGTGCTGAGTGGAAAGCGGCCAACAGATGCAGCATTCATCGAAAAGGGTCTCAATATTGTTGGTTGGTTGAATTTTCTTATTACAGAAAATAGGCCGAGGGAAATTGTTGACCCACTATGTGAAGGGGTGCAAGTTGAGAGCCTTGATGCCTTGCTCTCTGTGGCAATTCAGTGTGTTTCCTCAAGCCCAGAGGATCGACCCACTATGCACCGAGTGGTTCAATTGCTTGAATCAGAGGTCGTAACTCCATGCCCTAGTGACTTCTATGACTCCAACTCCGATTAG 3561 0.3962 MALWFYILATICLCISFQALLKVNRNKRLPPSPPTIPIIGNIFWLLKSSKNFADLEPVLRSLRSKYGNIVTIHIGSTPSIFITCHEAAHRALVKNGTVFAGRPLALKTTQVFFPNQYTVTTSPYGSNWRMLRQNLMQIIQPSKLKLYSHCRKWAFDVLKKHILDEIESGNKEITINGYLNYTLYALFSYICFGEKFDEKTIRDIQRVQHGFVHNFIRFNVLNFVPLLSKIVFRRLWREILEIRENQVNVLLPIIKARHEKMNSKVGIEDDNEEEFKAYVDTLFDMKLPSNGSKLTDEELVSVCAEFMLGGTDTTVTTWEWTMANLVKYQHIQEKLFEEIKEVVKPDEDIEEEHLKRMPYLKAVVLETLRRHPPGHFILPRAVTQDIVMDGYHIPKNAIVNFLVAEFGWDPNVWEDPMEFKPERFLRHDEGDAKFDLKGTTDIKMMPFGAGRRVCPAISMATLHLEYFVANLVRDFKWTLEEGCEVDMSEKQVFTIVMKNPLRPCVSPRINHLKTKVPIPSDCIILTCRTIISANPSLIWVLWSKMRDIKIKHFDNNVKKVFVSCQSAQPAFLSLSHLRSKSRQCPRLSALVAMGICLLKWQWPWLLCILLIRVVINESEAISPDGEVLLSFKTAVVSSDGILLQWRPEDPDPCKWKGVKCDPKTKRVTHLSLSHHKLSGSVSPDLGKLENLRVLALHNNNFYGTIPSELGNCTELEGIFLQGNYLSGVIPSEIGNLSQLQNLDISSNSLSGNIPASLGKLYNLKNFNVSTNFLVGPIPSDGVLANFTGSSFVGNRGLCGVKINSTCKADGSPETNGSTLSDQNQIGKRKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRISLAMDVGAGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGIGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHERSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKSDVYSFGVLTLEVLSGKRPTDAAFIEKGLNIVGWLNFLITENRPREIVDPLCEGVQVESLDALLSVAIQCVSSSPEDRPTMHRVVQLLESEVVTPCPSDFYDSNSD 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01098 1186 SUPERFAMILY L domain-like 622 787 - -
Cca06g01098 1186 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Cca06g01098 1186 Gene3D Ribonuclease Inhibitor 622 807 IPR032675 -
Cca06g01098 1186 SMART serkin_6 901 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g01098 1186 PANTHER RECEPTOR-LIKE PROTEIN 55 595 1186 - -
Cca06g01098 1186 Pfam Leucine rich repeat N-terminal domain 623 661 IPR013210 -
Cca06g01098 1186 Gene3D Phosphorylase Kinase; domain 1 875 976 - -
Cca06g01098 1186 Gene3D Transferase(Phosphotransferase) domain 1 977 1174 - -
Cca06g01098 1186 SUPERFAMILY Cytochrome P450 30 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01098 1186 Pfam Cytochrome P450 30 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01098 1186 SUPERFAMILY Protein kinase-like (PK-like) 886 1168 IPR011009 -
Cca06g01098 1186 Gene3D Cytochrome P450 22 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01098 1186 Pfam Protein kinase domain 903 1166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g01098 1186 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01098 1186 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01098 1186 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01098 1186 ProSiteProfiles Protein kinase domain profile. 901 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g01098 1186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1020 1032 IPR008271 GO:0004672|GO:0006468
Cca06g01098 1186 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 595 1186 IPR031071 GO:0004672|GO:0005524|GO:0030244
Cca06g01098 1186 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01098 1186 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01098 1186 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01098 1186 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01098 1186 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01098 1186 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01098 1186 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01098 1186 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01098 1186 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01098 1186 ProSitePatterns Protein kinases ATP-binding region signature. 907 933 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01098 Cca-Chr6 25058932 25074898 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01098 593 1177 Receptor kinase-like Gene Family AT2G35620 76.239 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Cca06g01098 p450 7.1e-93 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01098 - - gmx:100819230 1130.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01098 06 25058932 25074898 Cca06g01098 06 25058932 25074898 ECH