LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca06g01035	ATGGAGTTTAAGCCTGAGAGGTTTTTGAGGCATGATAAAGGTGATGCTAAGTTTGATCTGAAAGGGACTATAGATATTAAAATGATGCCTTTTGGTGCAGGAAGGAGAGTTTGTCCTGCAATTAGTATGGCAACTCTTCACCTTGAGTATTTTGTGGCCAATTTGGTGAGGGATTTTAAGTGGACACTTGAAGAGGGGTGTGAGGTTGACATGAGTGAGAAGCAGGTCTTCTCTATTGTGATGAAGAATCCTTTGAGGCCATGTGTGTCTCCAAGAATTAATCACTTGAAGACAAAGGTTCCCATCCCAAGTGACTGCATAATCTTAACTTGCAGAACTATTATTTCTGCCAATCCATCCTTGATATGGGTGTTATGGAGCAAGATGAGGGACATCAAGATCAAGCATTTTGATAACAATGTTAAGAAGGTCTTTGTCTCTTGTCAATCAGGGCACATGGTTAGTTATAATGTCCGTGAACTGTTAACTATTTTGCTCAACCTGCGTTTCTCTCACTCTCGCATCTCAGATCGAAATCCAGCACTTGTATATTCTGGACTGAATAATGGGTTGCATACTATTCTATGTTTAGCTTAG	597	0.402	MEFKPERFLRHDKGDAKFDLKGTIDIKMMPFGAGRRVCPAISMATLHLEYFVANLVRDFKWTLEEGCEVDMSEKQVFSIVMKNPLRPCVSPRINHLKTKVPIPSDCIILTCRTIISANPSLIWVLWSKMRDIKIKHFDNNVKKVFVSCQSGHMVSYNVRELLTILLNLRFSHSRISDRNPALVYSGLNNGLHTILCLA	198

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca06g01035	198	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	31	40	IPR017972	GO:0005506\|GO:0016705
	Cca06g01035	198	Gene3D	Cytochrome P450	1	99	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Cca06g01035	198	Pfam	Cytochrome P450	2	84	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Cca06g01035	198	PANTHER	FLAVONOID 3'-MONOOXYGENASE-RELATED	1	92	-	-
	Cca06g01035	198	PANTHER	CYTOCHROME P450 FAMILY PROTEIN	1	92	-	-
	Cca06g01035	198	SUPERFAMILY	Cytochrome P450	2	92	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca06g01035	Cca-Chr6	24318495	24328437	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cca06g01035	1	95	Cytochrome P450	AT1G64930	53.684	6.78e-31	115

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca06g01035	K24184		-	gmx:102660230	172.17

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