Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca06g01018 | ATGGGTTACGAAGACGATCCGTACCGCGACGAGGACGGTGAGCCTTTGATGGACTATGACGACGTTCAATCCGACCGTGAGCCCTCTCCGGAGCCGCAGCACCAGCTCGACGATTTGGAGGAGGACGTTGACGAGTGGCGCGGCCGCGATCGGTCGCAGACGCCGGTGTATGATAACGAGGCGTCGCGGTCGAAGCCGAGGAAGAGGCTGATCAAGAAGAGCGACGCCGGGAAGCAGGCGGTGGCGCCGGAGCTGgaggacgaggacgaggaggggtatgtgccggtgagcgtggaggagggagaggggaggaagaggaagaaggggaaggagggtgggagtgggaagaaggagaagaggatgaagggggagaAGAGGTTTGGGAGCGGTGGCGCTGGGAAGGGTGGGTCCAAATTTGGGGGTTCCAAGAAAGGTTTTGGTGGGAAGGCGGGGAAGGATCATGATGGTGAGGTTAAGGAGATGTGGGATACGATTGCTGGGGGAGATTCTGAGGATGATCAGGAGGGTGTCAGGAATATGGATGATGACAACTTTATAGATGACACCGGAGTGGAACATGGTTATTATGCTAGTGATAATGAACCACGGTCCCCTGGTGATGCTCCCCAGGCTGAGGAAGGTGAAGAGGATGAAGAAATTAAGGATCTTTTCAAGATAGGCaagaaaaagaagaagaatgagagaagCCCTGCTGAAATAGCTTTACTAGTTGAGAATGTCATGGCTGAGCTTGAGGTTACAGCTGAGGAAGATGCTGAGCTTAATAGACAGGGGAAGCCTGCCATTAATAAACTCAAGAAGTTGCCTCTTCTTACGGAAGTTCTCTCAAAGAAACAGCTTCAGCTAGAGTTTTTAGATCATGGAGTGCTAACTTTATTGAAGAATTGGCTTGAGCCACTTCCTGATGGAAGCTTGCCAAATATCAATATACGCACAGAAATTTTGAAGATTTTGAACGATTTTCCTATAGACCTAGAGCAGTATGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTTGGAAAGGTAATTATGTTTTTATCAAAGTCCGATGAAGAAATCAATGTAAATAGGAAACTAGCCAAGGAGCTGGTTGATAAGTGGAGCCGGCCTATATTTAATAAGAGTACTCGGTTTGAAGACATGAGGAGTATGGAAGATGATAGGGCTCCTTTTAGGAGGCCATCAGTTAAAAAGCCAACAAATAAAGCTGCTGGAATGGAATCTAGAGATAGCGATCTTGATTTGGAACTTTCACAGCCTAGGGCTGGACAGTCCTCTTCCAGGCAGCATGCATCAAGGCCAGAAGCAACACCTTTGGATTTTGTGATCCGTCCCCAATCTAAAATTGATCCAGAAGAAATCAGAGCACGAGCAAAACAAGCTGCCCAAGATCAGCAGCGTATGAAGATGAATAAGAAATTACAGCAATTGAGGGCACCAAAAAAGAGACAGCTTCAGGCTACAAAATTGAGTGTGGAAGGTCGTGGGTGGATCGATGAGCTTCCTTGTTGGCCTATAAATTTCTTTTCTCCCCCGAACCCGCACTCATTCTCACTTGCACTCTCCTTGCATCTTGGTTGCTGA | 1605 | 0.4343 | MGYEDDPYRDEDGEPLMDYDDVQSDREPSPEPQHQLDDLEEDVDEWRGRDRSQTPVYDNEASRSKPRKRLIKKSDAGKQAVAPELEDEDEEGYVPVSVEEGEGRKRKKGKEGGSGKKEKRMKGEKRFGSGGAGKGGSKFGGSKKGFGGKAGKDHDGEVKEMWDTIAGGDSEDDQEGVRNMDDDNFIDDTGVEHGYYASDNEPRSPGDAPQAEEGEEDEEIKDLFKIGKKKKKNERSPAEIALLVENVMAELEVTAEEDAELNRQGKPAINKLKKLPLLTEVLSKKQLQLEFLDHGVLTLLKNWLEPLPDGSLPNINIRTEILKILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEINVNRKLAKELVDKWSRPIFNKSTRFEDMRSMEDDRAPFRRPSVKKPTNKAAGMESRDSDLDLELSQPRAGQSSSRQHASRPEATPLDFVIRPQSKIDPEEIRARAKQAAQDQQRMKMNKKLQQLRAPKKRQLQATKLSVEGRGWIDELPCWPINFFSPPNPHSFSLALSLHLGC | 534 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca06g01018 | 534 | PANTHER | PROTEIN IWS1 HOMOLOG 1 | 1 | 506 | IPR044204 | GO:0009742|GO:0032784 | |
Cca06g01018 | 534 | MobiDBLite | consensus disorder prediction | 389 | 451 | - | - | |
Cca06g01018 | 534 | ProSiteProfiles | TFIIS N-terminal domain profile. | 298 | 381 | IPR017923 | - | |
Cca06g01018 | 534 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Cca06g01018 | 534 | PANTHER | PROTEIN IWS1 HOMOLOG 1 | 1 | 506 | - | - | |
Cca06g01018 | 534 | Coils | Coil | 244 | 264 | - | - | |
Cca06g01018 | 534 | MobiDBLite | consensus disorder prediction | 97 | 127 | - | - | |
Cca06g01018 | 534 | MobiDBLite | consensus disorder prediction | 19 | 65 | - | - | |
Cca06g01018 | 534 | Pfam | TFIIS helical bundle-like domain | 323 | 378 | IPR017923 | - | |
Cca06g01018 | 534 | MobiDBLite | consensus disorder prediction | 1 | 219 | - | - | |
Cca06g01018 | 534 | MobiDBLite | consensus disorder prediction | 425 | 440 | - | - | |
Cca06g01018 | 534 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 237 | 384 | IPR035441 | - | |
Cca06g01018 | 534 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 293 | 381 | IPR035441 | - | |
Cca06g01018 | 534 | MobiDBLite | consensus disorder prediction | 147 | 189 | - | - |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | IWS1 | Cca06g01018 | Med26 | 1.9e-13 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca06g01018 | K17498 | - | gmx:100801805 | 820.846 |