Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01010 ATGCTTGAGTTGATGTTTGTCGTGCCGTTCGAGTTCCCTTTCATCTTCACCAAGAAGATTCCTCTTGAAGCATTAGAGGCATATACCCAGATATCTAGTCACCCCTTTCACAAAACAAACAAACAAGGCATTATATCTCTTGATATCCTTCATTCTAAGGTGACCAGTGTAAAGTTTGTAGCTCAGGGCGAATCATTCTTAACTTTTTCAGCAGACAAGCCTTGCCATTGGACGAGAAGGAGGTGTTGCACCTTTGATTGCACTGGCACGGTCTGA 276 0.4312 MLELMFVVPFEFPFIFTKKIPLEALEAYTQISSHPFHKTNKQGIISLDILHSKVTSVKFVAQGESFLTFSADKPCHWTRRRCCTFDCTGTV 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01010 91 PANTHER PRE-MRNA-PROCESSING FACTOR 19 22 73 IPR038959 GO:0000398|GO:0000974|GO:0006281|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01010 Cca-Chr6 23965092 23971297 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01010 18 73 U-box Gene Family AT2G33340 39.785 2.21e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01010 K10599 - gmx:100527039 83.9593