Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00945 ATGGGAGATGTGGCAAAGGACCTTACAGCTGGGACTGTTGGAGGGGCATCACAATTGATAGTTGGACATCCATTTGACACCATCAAGGTCAAGCTTCAAAGCCAACCTACACCACTCCCTGGCCAGCTTCCCAGGTATTCTGGTGCAATTGATGCTGTCAAGCAGACAGTGGCAGCTGAAGGTCCAAGGGGTTTATACAAGGGTATGGGAGCCCCACTTGCCACAGTAGCCGCCTTCAATGCTGTCCTGTTTACAGTTAGGGGACAAATGGAAGCATTACTGAGGTCGCATCCCGGTGCTATCCTCACAGTAAATCAGCAGGTTGTTTGTGGAGCTGGAGCCGGGATTGCTGTTTCCTTTCTAGCATGCCCTACTGAATTGATCAAATGCAGATTGCAAGCTCAAAGTACGCTAGCTGGCTCCGGAGCAGCTGCAGTGGCAGTGAAATATGGTGGACCTATGGATGTGGCCAGGCATGTTCTCAGGTCAGAAGGGGGCTTGAAAGGTCTTTTCAAGGGCTTGGTTCCCACTATGGCACGAGAAATACCAGGAAATGCTGCAATGTTTGGTGCATATGAAGCATTAAAGCAATTACTTGCAGGTGGCACTGATACCTCAGGACTGGGTAGAGGTTCTTTGTTGCTTGCTGGAGGCTTGGCTGGAGCTGCCTTCTGGGCCATAGTTTACCCAACTGATGTTGTTAAGAGTGTGATTCAAGTAGATGATTACAAAAACCCAAAGTTTTCTGGTTCAATTGATGCTTTCAGAAGAATTCGAGCTTCTGAGGGGCTCAAAGGCCTGTACAAGGGTTTCGGTCCTGCTATGGCTCGAAGTGTTCCTGCTAATGCAGCTTGCTTCTTGGCATATGAAATGACAAGATCAGCTATGGGATGA 894 0.4877 MGDVAKDLTAGTVGGASQLIVGHPFDTIKVKLQSQPTPLPGQLPRYSGAIDAVKQTVAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMEALLRSHPGAILTVNQQVVCGAGAGIAVSFLACPTELIKCRLQAQSTLAGSGAAAVAVKYGGPMDVARHVLRSEGGLKGLFKGLVPTMAREIPGNAAMFGAYEALKQLLAGGTDTSGLGRGSLLLAGGLAGAAFWAIVYPTDVVKSVIQVDDYKNPKFSGSIDAFRRIRASEGLKGLYKGFGPAMARSVPANAACFLAYEMTRSAMG 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00945 297 Gene3D Mitochondrial carrier domain 2 98 IPR023395 -
Cca06g00945 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Cca06g00945 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 297 - -
Cca06g00945 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Cca06g00945 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Cca06g00945 297 Gene3D Mitochondrial carrier domain 99 297 IPR023395 -
Cca06g00945 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Cca06g00945 297 Pfam Mitochondrial carrier protein 214 295 IPR018108 -
Cca06g00945 297 Pfam Mitochondrial carrier protein 104 200 IPR018108 -
Cca06g00945 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Cca06g00945 297 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00945 Cca-Chr6 23134686 23139910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00945 22 291 Antiporters AT1G79900 34.657 2.58e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00945 K15109 - gmx:100787332 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00945 06 23134686 23139910 Cca06g00945 06 23134686 23139910 ECH