Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00933 ATGAACAAAAGTGCTGAATACCGACCACTAGACCCTGTTGAAAATGCTCCTAAAACGAGGGAGCAGAAGGTCAGAGCGAACGCCGCTAGATTGGGACACGCGAATGAGAATAGCATTGGGAGCCGCACGAGGCCTGGCGTTCCTCCACGTGTCAGCCAAACAGGTCCACGGCAACATCAAATCCTCCAACATCCTCCTCCACCCGAACCACGACCTCTGCGTTTCGGACTTCGGGCTGAACCGATATTCGCGAACCCGGTTCCCTCGAACCGGGTGGCAGGTTACCGGGCTCCGGAGGTTCTGGAAACCCGAAAGGTGACATTGAAATCCGACGTGTACAGCTTCGGCGTGCTGGTGCTGGAGCTCCTAACGGGCAAGGCGCCGAACCAAGCCTCGCTGAGCGAGAAAGGGATCGACCTTCCACGTTGGGTGCAGTCAGTGGTGCGCGAAGAGTGGACCGCGAAAGTGATCGACGCGGAACTCATGAGGTTCCAGAACATCGAAGAGGAGATGGTTCAGTTGTTGCAGATTGCCATTGAGAAGAACAAGAACAAGATCACCAAGGAAGAGGACGGAGATGTCTTGCTGATACCAATTGTAAATTCCTTATTGAGAATTGCGTGA 624 0.5417 MNKSAEYRPLDPVENAPKTREQKVRANAARLGHANENSIGSRTRPGVPPRVSQTGPRQHQILQHPPPPEPRPLRFGLRAEPIFANPVPSNRVAGYRAPEVLETRKVTLKSDVYSFGVLVLELLTGKAPNQASLSEKGIDLPRWVQSVVREEWTAKVIDAELMRFQNIEEEMVQLLQIAIEKNKNKITKEEDGDVLLIPIVNSLLRIA 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00933 207 Pfam Protein kinase domain 94 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g00933 207 PANTHER RECEPTOR-LIKE KINASE 80 179 - -
Cca06g00933 207 Gene3D Transferase(Phosphotransferase) domain 1 69 187 - -
Cca06g00933 207 MobiDBLite consensus disorder prediction 13 27 - -
Cca06g00933 207 SUPERFAMILY Protein kinase-like (PK-like) 93 182 IPR011009 -
Cca06g00933 207 MobiDBLite consensus disorder prediction 1 70 - -
Cca06g00933 207 ProSiteProfiles Protein kinase domain profile. 1 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g00933 207 PANTHER OS05G0588300 PROTEIN 80 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00933 Cca-Chr6 22905051 22908181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00933 75 179 Receptor kinase-like Gene Family AT5G58300 69.524 1.31e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Cca06g00933 Pkinase 4.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00933 - - gmx:100784259 177.178