Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00921 ATGGCTTTCCTCAACTCATCAAAACCTAACCTCCTCCAATCTCTAAGTCCCCTTTCTACTCTACTTATCAAATTCCTCATCCCTTTCCTCTTGCTACAACATCACATTGTCAAGTCACAATTTTCACCAGCCCTAGCAAATGACGAAAGCATTTTCTTCGGCATCTCTCTTTTCAGCAAAGAAGATCCAAACATAATCTTGTTGGGAAATGCCTCAATATCTGGTGGGGTTCTAAGGTTAACCAACAACGACCAATTCGGCCAACCAGTCACACACAGTGTTGGCCGAGCAGTGCACTTGACACCTATTCACCTCTGGAACAGACACAATGGAGACCTGGCAGACTTCGGTGCTGCCTTTTCCTTTGTGGTGAACTCAAAAGGTTCAACACTTCATGGTGATGGTTTTGCGTTCTTTCTCGCACCGGCAGATTTTCACTTCCCCAAAAATTCAAGTGGTGGGTACCTTGGTCTTTTCAATCCCGATAATGCTTTCGACCCTTTCAGGAACCAAGTAGTGGCTATTGAGTTTGATAGTTTCACCAATGAGTGGGACCCCAGTTCACCAGTCCAGGTTCCTCACATTGGAATTGACGTTGGCTCTGTTAAATCAGTGGCAGCTGTGCCATGGCCAAGTGAATTGGAATCGCCAAGTGCTATAGCACATGCGAGCCTGAACTATAACTCCGAGTCCAAGAGATTGAGTGTGTTTGTGGGTTACCCTGACAATAGGAATGCCACTGTCTCTGCCCTAGTTGATTTGAGGAACATTTTGCCGGAATGGATCAGAGTTGGTTTCTCCGCCTCCACTGGTGAGTTGGTTGAAACGCATGACATTCTGAGCTGGTCTTTCGAAGCTACCTTGTAG 867 0.4614 MAFLNSSKPNLLQSLSPLSTLLIKFLIPFLLLQHHIVKSQFSPALANDESIFFGISLFSKEDPNIILLGNASISGGVLRLTNNDQFGQPVTHSVGRAVHLTPIHLWNRHNGDLADFGAAFSFVVNSKGSTLHGDGFAFFLAPADFHFPKNSSGGYLGLFNPDNAFDPFRNQVVAIEFDSFTNEWDPSSPVQVPHIGIDVGSVKSVAAVPWPSELESPSAIAHASLNYNSESKRLSVFVGYPDNRNATVSALVDLRNILPEWIRVGFSASTGELVETHDILSWSFEATL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00921 288 Gene3D - 49 288 - -
Cca06g00921 288 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 1 288 - -
Cca06g00921 288 PIRSF Plant_L_lectin 21 288 IPR016363 GO:0030246
Cca06g00921 288 SUPERFAMILY Concanavalin A-like lectins/glucanases 51 287 IPR013320 -
Cca06g00921 288 Pfam Legume lectin domain 53 286 IPR001220 GO:0030246
Cca06g00921 288 PANTHER LECTIN 1 288 - -
Cca06g00921 288 CDD lectin_legume_LecRK_Arcelin_ConA 53 288 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00921 Cca-Chr6 22801081 22802267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00921 50 288 Receptor kinase-like Gene Family AT5G10530 35.857 6.81e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00921 - - gmx:100780546 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00921 06 22801081 22802267 Cca11g00773 11 14356737 14358866 PCT
Cca11g00775 11 14393048 14394069 Cca06g00921 06 22801081 22802267 PCT