Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00917 ATGGAAGTGCAGCCAGAATTTGAGCATCCCAACAAGGCATTCGGATGGGCAGCAAGGGATCCTTCTGGTCTTCTCTCCCCTTTCAATTTCTCCAGAAGGGAAACGGGTGAGAAAGATGTGGCATTCAAAGTGCTGTACTGTGGGATATGCCACTCGGATCTCCACAGTGTGAAGAACGAATGGGGCACTTCCATCTATCCAATGGTTCCGGGACATGAGTTAGCTGGCGTAGTAACAGAGGTGGGAAGCAAGGTTGAAAAGTTCAAAGTGTTAGttggggacatggttggtgtgggATGCATGGTTGATTCATGCCGTACCTGCCAAAATTGTTCCGACAATCTTGAGAATTATTGTCCACAGCTTACGCTCACATATGGTGCCAAGTTTAAAGATGGCACCATCACATATGGAGGTTACTCTGACTCAATGGGTGCGATGGGTACTTTGGATGGTATTATTGACACAGTTTCTGCCGTTCATCCTCTCTTACCTCTCTTTGATTTACTCAAGTATCATGGAAAGCTTGTAATGGTGGGTTTACCAGAGAAGCCTCTAGAACTGCCAATCTTTCCTTTAGTTGTGGGGAGAAAAATAGTAGCTGGCAGTATCATTGGAGGGTTAAAGGAGACGCAAGAAATGATTGATTTTGCAGCGAAATACAATGTGAAACCTGACATTGAAGTCATTCCAATGGACTATGTCAACACAGCTATGGAGCGCCTCCGCAAATCCGATGTTAAGTATCGATTTGTAATTGACATTGGAAACACACTGAAACCAAGCTCATGA 792 0.4318 MEVQPEFEHPNKAFGWAARDPSGLLSPFNFSRRETGEKDVAFKVLYCGICHSDLHSVKNEWGTSIYPMVPGHELAGVVTEVGSKVEKFKVLVGDMVGVGCMVDSCRTCQNCSDNLENYCPQLTLTYGAKFKDGTITYGGYSDSMGAMGTLDGIIDTVSAVHPLLPLFDLLKYHGKLVMVGLPEKPLELPIFPLVVGRKIVAGSIIGGLKETQEMIDFAAKYNVKPDIEVIPMDYVNTAMERLRKSDVKYRFVIDIGNTLKPSS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00917 263 CDD CAD1 14 254 - -
Cca06g00917 263 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Cca06g00917 263 Gene3D - 30 144 - -
Cca06g00917 263 Gene3D - 147 225 - -
Cca06g00917 263 Gene3D - 226 253 - -
Cca06g00917 263 SUPERFAMILY GroES-like 9 143 IPR011032 -
Cca06g00917 263 Pfam Alcohol dehydrogenase GroES-like domain 38 141 IPR013154 -
Cca06g00917 263 PANTHER ALDEHYDE REDUCTASE 1 145 - -
Cca06g00917 263 PANTHER ALDEHYDE REDUCTASE 145 262 - -
Cca06g00917 263 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 147 223 IPR036291 -
Cca06g00917 263 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 145 - -
Cca06g00917 263 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 145 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00917 Cca-Chr6 22720338 22731742 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00917 146 262 Monolignol Biosynthesis Gene Families AT4G37990 72.650 2.20e-49 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00917 - K23232 gmx:100816901 266.544