Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00911 ATGGCAACACAACCTCAAATTCAGCATCCCAACAAGGCATTAGGATATGCAGCAAGGGACCCTTCTGGGCTTCTCTCCCCTTTCAATTTCTCCAGAAGGGAAACCGGTGAAAAAGATGTGGCTTTCAAAGTGTTGTATTGTGGGATATGTCATTCTGATCTCCACATGGTCAAGAACGAATGGGGATTTTCCACCTATCCGCTGGTTCCAGGGCATGAGGTCGTTGGTGTAGTGACAGAAGTGGGAAGCAAAGTAGAAAAGTTCAAAGTTGGAGACAAGGTGGGTGTGGGATGCATGGTTGATTCATGCCGCACCTGCCAAAACTGTGCTGAAAATCTTGAGAATTATTGTCCACAATTTACGCTCACATATGGTGCTAAACATAAAGATGGCAGCATCACATATGGAGGCTACTCTGACTCAATGGTTGCAGATGAACACTTCGTGGTTCGCATTCCTGAAGGGTTACCACTTGATGCTGCTGCACCTCTCCTTTGTGCTGGCATCACTGTGTATAGCCCTCTCAGATATTTTGCTCTAGACAAACCTGGACTACACGTGGGTGTGGTTGGTCTTGGTGGACTAGGCCATGTCGCTGTCAAGTTTGCCAAAGCCTTTGGGGCAAAGGTGACTGTAATAAGTACATCACCAAACAAAAAGGAAGAAGCAATACAAAATCTTGGAGCTGATTCCTTTTTGATAAGCCGTGACCAAGATCAGATGCAGGGTGCAATGGGTACTTTGGATGGTATTATTGACACAGTTTCTGCCGTTCATCCTCTCTTACCTCTCATTGGTTTACTCAAGTCTCATGGAAAGCTTGTAATGGTTGGTGCACCAGAGAAGCCTCTGGAGATGCCAGTCATTCCTTTAATTATGGGGAGAAAGATAGTTGCTGGGAGTAGCATAGGAGGGATGAAAGAGACCCAAGAGATGATTGACTTTGCTGCAGAACACAATGTAAAACCTGACATTGAAGTCATTCCTATTGATTATGTCAACACAGCAATGGAGCGCCTCCACAAAGCAGATGTTAAGTATAGATTTGTGATTGACATTGGAAACACACTAAAATCAACTTCTTAA 1086 0.4448 MATQPQIQHPNKALGYAARDPSGLLSPFNFSRRETGEKDVAFKVLYCGICHSDLHMVKNEWGFSTYPLVPGHEVVGVVTEVGSKVEKFKVGDKVGVGCMVDSCRTCQNCAENLENYCPQFTLTYGAKHKDGSITYGGYSDSMVADEHFVVRIPEGLPLDAAAPLLCAGITVYSPLRYFALDKPGLHVGVVGLGGLGHVAVKFAKAFGAKVTVISTSPNKKEEAIQNLGADSFLISRDQDQMQGAMGTLDGIIDTVSAVHPLLPLIGLLKSHGKLVMVGAPEKPLEMPVIPLIMGRKIVAGSSIGGMKETQEMIDFAAEHNVKPDIEVIPIDYVNTAMERLHKADVKYRFVIDIGNTLKSTS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00911 361 Gene3D - 16 353 - -
Cca06g00911 361 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 359 - -
Cca06g00911 361 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Cca06g00911 361 PANTHER ALDEHYDE REDUCTASE 1 359 - -
Cca06g00911 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Cca06g00911 361 SUPERFAMILY GroES-like 19 184 IPR011032 -
Cca06g00911 361 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Cca06g00911 361 Gene3D - 167 323 - -
Cca06g00911 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Cca06g00911 361 CDD CAD1 15 352 - -
Cca06g00911 361 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00911 Cca-Chr6 22656268 22658295 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00911 12 358 Monolignol Biosynthesis Gene Families AT4G37990 73.775 2.56e-178 497