Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00909 ATGGATCCGATTCAATCGAACGACGTCCATATAGACCCACAAACCCTAATCTCAGAGCCTAAAGATTCTCTAATGCAAGACGCCGGCGAGTCCTTGTTCGATTCGATGGTTTGCGATTCCAGTTCAAGACTCATCCCAACTGGGTTCACCAGATCTGACAACGCAGCAGAAGAGGAGTGTTTCATGTTTGTAAACGCGGGAGGGGATGCTTTTAGTGAAGCAGCTGGTGGAATAACGTTCCTGGCTGACACCTATTTTGATGGTGGCAACGTTTTGCGTACCAATGAGCAAATAGTGGAGGGTGGAGACTACCCGTTTATCTATCAATCAGCTCGGTTGGGAAGCTTTTGTTACAGGTTTGATAATCTTCCTCCTGGAGACTTTGTTGTGGATCTTCATTTTGTGGAGATCATCAACACAAATGGGCCAAAAGGAATGAGGGTGTTCAATGTATACATCCAAGATGAAAAGGTTCTAGCTGAATTGGATATCTATGCTGTTGTTGGAGCCAATAAGCCAGTACAGTTGGTTGATTCAAGGGTGTCTGTGAAGGATGATGGGGTAATTCTCATAAGATTTGAAAGTATAACTGGAAGCCCAGTCGTTAGTGGGATTTGCATTAGGAGAGCAACAAAGCTGTCAGCTCCACTAGTGACAAGTGATTACATTAAGTGTGGCTACTGCGCTGCACAGATTGAAATTCCCTCATCACAGATGAAAGTTATGCAGGCAAAGTCCACGGCAAAGTACAAGAATAAGATAAAAGAGCTCACTATGCAGTGCGAGCTCAAGGCAAAAGAATGCTATGAGGCATGGATGTCATTAACTGCGACAAATGAGCAACTAGTGGCAGTTCAGATGGAACTTGACAAAGTGACATTTAAGTCACTCACAACTGATCAAACTGTGGAGAAACAAGCTGAAAGCCTGAAGAATATTTCTAATAGTTACGAGCTTGATAAGCAGAAATGGACAGAAGCAATTAACAGTTTACAGGAAAAAATAAAGTTGATGAAGAGTGATTATTCAAAACTTTCCTTTGAAGCGCATGAATGTGTTGATTCAATCCCTGAATTAAATAAGATGGTTTTTGCAGTACATGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAGTACAACGAAGAGATGACAATGAGAAAGAAACTCTTCAATGAAGTTCAAGAGGCTAAAGGAAACATCAGGGTTTTCTGTCGTTGCCGTCCATTGAATAAGGCTGAAATATCAGCTGGGTACAATACAGTTGTGGATTTTGATGCAGCAAAGGATGGATCCCTAGGAATTTTAACAGGTGGCTCCACCAAAAAACCATTCAGATTTGACAGAGTTTATACACCAAATGATGACCAAGTTGATGTTTTTGCTGACGCATCATCAATGGTAATCTCTGTACTGGATGGCTACAATGTTTGCATCTTTGCTTATGGACAAACAGGAACAGGGAAGACATTCACCATGGAAGGAACAGAACAAAATAGAGGAGTAAATTACAGGACTCTTGAGCACTTGTTTAAAATTAGTAATGAAAGGAGTGAAACATTCAAATATGACATATCTGTTAGTGTGCTTGAGGTTTACAATGAACAAATCAGAGACTTGTTGGCTACAGGACCTACATCAAAAAGGTTGGAGGTGAAACTAGCTTCTGAAGGGTTTCATCATGTTCCTGGTGTTGTAGAAGTCAAGATTGATAACATAAATGAAGTCTGGAGTGTACTGCAGGCTGGAAATAATGCTAGAGCAGTTGGAAGTAATAACGTTAATGAACATAGCAGCCGATCTCACTGCATGCTTTGTATAACAGTAAAGGCTAAAAATCTGTTGAATGGCGCATGTACCAAGAGCAAACTTTGGCTAGTGGATTTGGCAGGTAGTGAGAGAATTGGAAAGACTGCAGCGGAAGGGGAACGACTTAAGGAAGCACAAAATATCAATAGATCTCTATCTGCTCTTGGAGATGTAATATCTGCTTTAGCAGCTAAAAGTAGTCACATTCCATATAGGAACTCTAAACTGACACAGTTGCTTCAAGACTCGCTAGGTGGTGAATCCAAAACCTTGATGTTTGTACAAATAAGTCCATCAGACCAGGACTTAAATGAGACACTGAGCTCACTTAATTTTGCAACTAGAGTGAGGGGTGTTGAGTTAGGTCCTGTCAAGAAACAAATTGATACAAGTGAACTTAATAAGATGAAGACAATGCTTGAAAAAGCACGGAGTGAGTGCAAAATGAAAGATGAAACTATGCGAAAACTTGAAGAAAACATGCAAAGCATGGAGAGCAAGGCTAAAGGCAAGGATCAAATTTCCAAAAGTCTACAAGAAAAGATTAAAGAACTTGAGGGACAGATCGAGTTGAGAAAATCCATGCAAAATGAGTCAGAGAAACAAATTTCTCAATTATCTGACAAATTGAGAGGGAAGGAAGAAACCTGCTGTACCCTCCAACAAAAGGTGAAAGAGCTAGAGAGAAAGATGAAAGAACAACTGCAGTCAGAGTCAGCAACTTTACAACAGAAGGTTAGGGATCTAGAGAAAAAGCTGAAAGATCAGATGCAAGGGTCTGAGTCTGAATCTGCCATTTTGAAAGATAAGATCAAGGAGCTTGAGAGAAAACTGAAAGAGCAGGAACAGAGCTCAATGTCCTTGCTTCATCAACAGATGAAAGAACTAGAGGATAGGTACAGAGAACGAGAGCAACAGTGGCAACAAACTCATTGTTTTGTGGATGCAGTAAAAGCCACACCTGAGGTAGGTAAAAGCTGCACGAGTGAAGAATGTCCAAGCGAGATTGACGCTGGCATTTTAAGGTGTTCAAACTCAGTGAACCGCCAGATAATTCAAGGTTCTTTGTTCAAAGGGAATGATTCCACTCATCAGATAAGAAGCAAAAGAGAGTTTAGAAGCAATGATGAAAACAACTTTGTCATGTCATCATCATTACACGATAGAAAAATCACAAGGAAATCTGATCCACCTAAAATAGTGAGGGGTGGAAGACCAACACCAAGACCAGTCATTGGTAGCCAAGCTGCAGTAGTGTCCCACAAGAGAGCTAGCACAAGCAGAGATCAGGCTCAAGGAATCAGAGAGAGGGACAGTAAGAAGAAAATCTGGTCAAGATAA 3150 0.4079 MDPIQSNDVHIDPQTLISEPKDSLMQDAGESLFDSMVCDSSSRLIPTGFTRSDNAAEEECFMFVNAGGDAFSEAAGGITFLADTYFDGGNVLRTNEQIVEGGDYPFIYQSARLGSFCYRFDNLPPGDFVVDLHFVEIINTNGPKGMRVFNVYIQDEKVLAELDIYAVVGANKPVQLVDSRVSVKDDGVILIRFESITGSPVVSGICIRRATKLSAPLVTSDYIKCGYCAAQIEIPSSQMKVMQAKSTAKYKNKIKELTMQCELKAKECYEAWMSLTATNEQLVAVQMELDKVTFKSLTTDQTVEKQAESLKNISNSYELDKQKWTEAINSLQEKIKLMKSDYSKLSFEAHECVDSIPELNKMVFAVHELVKQCEDLKVKYNEEMTMRKKLFNEVQEAKGNIRVFCRCRPLNKAEISAGYNTVVDFDAAKDGSLGILTGGSTKKPFRFDRVYTPNDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFKISNERSETFKYDISVSVLEVYNEQIRDLLATGPTSKRLEVKLASEGFHHVPGVVEVKIDNINEVWSVLQAGNNARAVGSNNVNEHSSRSHCMLCITVKAKNLLNGACTKSKLWLVDLAGSERIGKTAAEGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTQLLQDSLGGESKTLMFVQISPSDQDLNETLSSLNFATRVRGVELGPVKKQIDTSELNKMKTMLEKARSECKMKDETMRKLEENMQSMESKAKGKDQISKSLQEKIKELEGQIELRKSMQNESEKQISQLSDKLRGKEETCCTLQQKVKELERKMKEQLQSESATLQQKVRDLEKKLKDQMQGSESESAILKDKIKELERKLKEQEQSSMSLLHQQMKELEDRYREREQQWQQTHCFVDAVKATPEVGKSCTSEECPSEIDAGILRCSNSVNRQIIQGSLFKGNDSTHQIRSKREFRSNDENNFVMSSSLHDRKITRKSDPPKIVRGGRPTPRPVIGSQAAVVSHKRASTSRDQAQGIRERDSKKKIWSR 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00909 1049 CDD KISc_C_terminal 398 724 - -
Cca06g00909 1049 Pfam Kinesin motor domain 406 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g00909 1049 ProSiteProfiles Kinesin motor domain profile. 400 722 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g00909 1049 Coils Coil 828 909 - -
Cca06g00909 1049 Coils Coil 314 341 - -
Cca06g00909 1049 PRINTS Kinesin heavy chain signature 474 495 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g00909 1049 PRINTS Kinesin heavy chain signature 592 609 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g00909 1049 PRINTS Kinesin heavy chain signature 623 641 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g00909 1049 PRINTS Kinesin heavy chain signature 672 693 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g00909 1049 SMART kinesin_4 398 730 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g00909 1049 ProSitePatterns Kinesin motor domain signature. 622 633 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca06g00909 1049 Coils Coil 743 819 - -
Cca06g00909 1049 Gene3D Kinesin motor domain 395 767 IPR036961 -
Cca06g00909 1049 PANTHER KINESIN-LIKE PROTEIN KLP-3 28 1035 - -
Cca06g00909 1049 PANTHER KINESIN-LIKE PROTEIN KIN-14R 28 1035 - -
Cca06g00909 1049 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 759 IPR027417 -
Cca06g00909 1049 Gene3D - 56 212 - -
Cca06g00909 1049 Pfam Malectin domain 63 205 IPR021720 -
Cca06g00909 1049 MobiDBLite consensus disorder prediction 993 1049 - -
Cca06g00909 1049 SUPERFAMILY Tropomyosin 730 914 - -
Cca06g00909 1049 MobiDBLite consensus disorder prediction 1031 1049 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00909 Cca-Chr6 22615006 22622823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00909 372 776 Calmodulin-binding Proteins AT5G65930 40.777 3.11e-86 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00909 K10406 - gmx:100800016 1790.78