Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00886 ATGGCGGAGCAGGGTAACCGTTGGAGCTGGGACCTCACCGGCTTCGAGCCGTGGAAGTCGCCGTCGCAGTCGCCGGAGCAAAACGATCAGAAACCTACTTCACCGTTGGTGAGGAGACACTCCACCTCCTCGGTTCCTCCGCACTCCTTGGCTTCCAAGGTTGAGGGACTACGAGACAAAATTAAGCTTGCTAGAAATGACTACCTGCAGTTAAGGCAAGAAGCAAGTGAACTTCAAGAATATTCAAATGCAAAACTTGACCGGGTTACACGATATCTTGGTGTTCTTGCAGAGAAAACCCACAAGTTAGATCAAGTAGCCCTTGAAACCGAGGCAAGGATATCTTCTGTGATCAATGAGAAGAGGAGACTGTTCAATGACTTATTGACATCTAAAGGAAACATACGAGTATTCTGCCGTACTAGGCCATTATttgaagatgaaggtccctcagttgttgaatttccagatgattataccatcCGTGTAATTACTGGAGATGAATCCTTGTCTAACTCCAAGAAAGAATTTGAATTTGATAGAGTCTACGGACCTCATGTTGGACAGGCTGAGTTGTTCAGTGATGTTCAGCCAATGGTGCAATCAGCTTTGGATGGATATAATATTTCCTTATTTGCATATGGACAAACACATTCTGGAAAGACACACACTATGGAAGGATCAAACTATGATAGGGGTTTATATGCTCGCTGTTTTGAGGAGTTGTTTGATTTAGCCAACTTGGACACAACTGCTACTTCTCAATACAAATTCTGCATTACTGTTTTTGAGCTCTATAATGAACAGATAAGGGATCTGCTCTTGGACTCGGAGTCAGGGAAAAGCTTGCCTAAACTGTGTTTTGGATCACCTGAATATTTCATAGAACTAGTGCAGGAAAAAGTTGATAACCCTCTGGACTTTTCTAGGGTTCTGAAAGCTGCATTACTGAGTCGAAGAAATAATCCATTAAAGATTAATGTTTCTCATTTGATTGTTACAATACACATATTTTGTAACAATTTAATCACTGGTGAAAACTCATATAGCAAGCTCTCTCTGGTTGATTTGGCTGGAAGTGAAGGTTTGATAACAGAAGATGATAGTGGTGAGCGTGTCACGGATTTTCTGCATGTTATGAAGTCTCTTTCAGCGTTGGGAGATGTTTTGTCTTCTTTGACATCAAAAAAGGATGTTATTCCTTATGAAAACTCGGTGCTAACAAAACTATTTGCGGATTCACTTGGTGGGAGTTCAAAAACTCTAATGATTGTAAATGTGTGTCCAAATTCTTCAAATTTATCTGAGACATTACTGTCTCTCAATTTCTCTTCCAGAGCTCGAAGTTCTGTATTAAGCCTTGGAAATCGAGATACAATTAAGAAGTGGAGGGATGTTGCAAACAATGTGCGTAAGGAGTTATATGAGAAGGAAAAAGAAATCCAAGATCTAAAACATGAAGGTCTGAGACTTAAGCAAGCACTTAAAGATGCAAATGATCAATGTGTTCTACTCTTCAATGAAGTAAAGAAGGCATGGAAAGTTTCTTCTGCATTGCAAGCAGATTTAAAGTCAGAGCATATTTTGCTGGCTGATAATTATAAGGTAGAGAAAGAACAAAATGCTGAGCTTAGAAATCAAGTTGCTCATATGTTACAGTCAGAACAAGAGCAAAAATTGCAGATACAACAGCGCGATTCAACCATCCAAAGTTTGCAGGCTAAAATTGGAAGCCTCGAAGTACAACTCAATGAAGCCCTTATATCCAGCCACACTAGGTTAAATGTTGGCCCAGAAACAGTGTCTGAAGATCTATCTAATTCCAGGACAACAGGGGATAGCATGGATTCATTTGCAGTAGCCAAGAAACTAGAAGAGGAACTCAAGAAACGCGATGCTCTGATTGAGAGGTTGCATGTAGAAAATGAGAAATTATTTGATAAATTGACTGAGAAAGCATCTCGGGCTGGATCACCTCAGCTTTCAAGTCCATTATCTAGTGGATCAGTTAATGTTCAGCCTCAGAATATGGGAAGGAACGACACCAGCAACACTGCAAGAGCACGATCTGTGGATGTTCTTCCTTCATCTTTAATGGTGACAGATAAGAATGATGGCACGGTTGCTTTAATTAAATCTGCTTCTGAGAAAGTTAAGACTACCCCTGCCGGTGAATATCTTACTGCTGCCCTGAATGACTTTAATCCTGATCAATATGAAGGCCTTGCTGCCATTTCTGATGGTGCAAACAAGCTTTTGATGCTGGTTCTGGCTGCTGTCATCAAAGCTGGTGCCTCCAGAGAACATGAAATACTTGCTGAAATTAGGGATGCTGTTTTTTCATTTATTCGTAAAATGGAACCAAAGCGAGTAATGGATACCATGCTTGTTTCTCGTGTTAGAATCTTGTATATAAGATCTTTGCTTGCTAGATCCCCAGAGTTGCAATCCATTAAGGTATTGCCAGTTGAGTGCTTTCTTGAAAAGTCCAACACTGGACCCAGTAGAAGTTCCAGCCGGGCAAGTAGTCCTGGAAGATCTTCTGTGCAATATGCTGATGAGCAGATCCAGGGATTTAAAGTGAATTTAAAGCCAGAAAAGAAATCTAAATTTTCATCTGTTGTGTTGAAGATACGTGGGATTGATGAGGAGACCTGGAGACAGCAGGTAACTGGGGGAAAGCTTAGGGAAATTAGCGGGGAAGCAAAAACTTTTGCAATTGGAAACAAGGCTCTTGCTGCACTCTTTGTGCATACTCCAGCAGGTGAGCTGCAGCGCCAACTTAGATCCTGGCTTGCAGAGAAGTTTGATTTTCTCTCTGTTATGGGAAATGAAGCACTGGGGGGGACAACTGGTCAGTTGGAGCTTATTTCAACTGCAATTATGGATGGTTGGATGGCTGGACTTGGCAGTGCTCTGCCTCCCCAAACTGATGCCCTTGGCCAACTTTTATTTGAATATTCAAAACGTGTCTATACTTCTCAACTGCAGCACTTGAAGGATATTGCGGGTACGTTGGCAACAGAAGAGGCTGAAGATGCAGCACAGGTGATCAAGTTGCGTTCAGCTCTAGAATCTGTTGATCACAAGAGAAGAAAGATTTTACAACAAATGAGAAGTGATGTCGCTCTGCTGACATTGGAAAATCGTGGTTCATCTATTCAAAATCCTTCTACTGCTGCGGAGGATGCACGATTAGCATCTCTCATTTCACTTGATAGAATATTGAAGCAAGTCCAGGATATAACTAAACTTTCTACTGTGATCACCATCGAGAAAAGTAAGAAAAGAACAGTGCTTGGTTCTCTTGATAAACTGGCAGAACAAATGCCTTCGCTTCTTGAAATTGATCATGAATGTGCTCAGAGGTACATTGCAGATGCTCGCCGAATGGTTGAGTCAATTCCTGAAGAAGATGATCACCTTCAAAATCTATCACATTCTCGCAAGCCGTCAACTGATACAGGCTCTGGATCTGGAACTGATGTGGCACAATGGAACGTCCTTCAATTCAATACGGGCAATACCTCACCATTTATAATCAAATGTGGAGCAAACTCAAATTCAGAACTAATCATTAAAGCCGAGGCTCGAGTTCAGGAACCTAAAGGAGGTGAGATTGTGAGGGTTGCCCCAAGGCCGTCCATTTTGGAAAACATGAACTTGGAGGAAATGAAGCATGTATTTGCTGAATTACCTGAAGCTCTAAGCTTGCTTGCCCTGGCAAGGACTCCCGATGGAACTCGAGCACGATATTCTAGATTATATAGGACCTTGGCTCTGAAGGTTCCATCACTTAGGGATCTGATCACTGAGCTTGAAAAAGGGGGTGCGCTGAAAGATATGAGAACATGA 3855 0.4125 MAEQGNRWSWDLTGFEPWKSPSQSPEQNDQKPTSPLVRRHSTSSVPPHSLASKVEGLRDKIKLARNDYLQLRQEASELQEYSNAKLDRVTRYLGVLAEKTHKLDQVALETEARISSVINEKRRLFNDLLTSKGNIRVFCRTRPLFEDEGPSVVEFPDDYTIRVITGDESLSNSKKEFEFDRVYGPHVGQAELFSDVQPMVQSALDGYNISLFAYGQTHSGKTHTMEGSNYDRGLYARCFEELFDLANLDTTATSQYKFCITVFELYNEQIRDLLLDSESGKSLPKLCFGSPEYFIELVQEKVDNPLDFSRVLKAALLSRRNNPLKINVSHLIVTIHIFCNNLITGENSYSKLSLVDLAGSEGLITEDDSGERVTDFLHVMKSLSALGDVLSSLTSKKDVIPYENSVLTKLFADSLGGSSKTLMIVNVCPNSSNLSETLLSLNFSSRARSSVLSLGNRDTIKKWRDVANNVRKELYEKEKEIQDLKHEGLRLKQALKDANDQCVLLFNEVKKAWKVSSALQADLKSEHILLADNYKVEKEQNAELRNQVAHMLQSEQEQKLQIQQRDSTIQSLQAKIGSLEVQLNEALISSHTRLNVGPETVSEDLSNSRTTGDSMDSFAVAKKLEEELKKRDALIERLHVENEKLFDKLTEKASRAGSPQLSSPLSSGSVNVQPQNMGRNDTSNTARARSVDVLPSSLMVTDKNDGTVALIKSASEKVKTTPAGEYLTAALNDFNPDQYEGLAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFSFIRKMEPKRVMDTMLVSRVRILYIRSLLARSPELQSIKVLPVECFLEKSNTGPSRSSSRASSPGRSSVQYADEQIQGFKVNLKPEKKSKFSSVVLKIRGIDEETWRQQVTGGKLREISGEAKTFAIGNKALAALFVHTPAGELQRQLRSWLAEKFDFLSVMGNEALGGTTGQLELISTAIMDGWMAGLGSALPPQTDALGQLLFEYSKRVYTSQLQHLKDIAGTLATEEAEDAAQVIKLRSALESVDHKRRKILQQMRSDVALLTLENRGSSIQNPSTAAEDARLASLISLDRILKQVQDITKLSTVITIEKSKKRTVLGSLDKLAEQMPSLLEIDHECAQRYIADARRMVESIPEEDDHLQNLSHSRKPSTDTGSGSGTDVAQWNVLQFNTGNTSPFIIKCGANSNSELIIKAEARVQEPKGGEIVRVAPRPSILENMNLEEMKHVFAELPEALSLLALARTPDGTRARYSRLYRTLALKVPSLRDLITELEKGGALKDMRT 1284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00886 1284 Coils Coil 621 644 - -
Cca06g00886 1284 MobiDBLite consensus disorder prediction 655 683 - -
Cca06g00886 1284 MobiDBLite consensus disorder prediction 16 49 - -
Cca06g00886 1284 PRINTS Kinesin heavy chain signature 206 227 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g00886 1284 PRINTS Kinesin heavy chain signature 351 369 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g00886 1284 PRINTS Kinesin heavy chain signature 400 421 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g00886 1284 Coils Coil 569 589 - -
Cca06g00886 1284 Coils Coil 460 501 - -
Cca06g00886 1284 PANTHER KINESIN-LIKE PROTEIN KIN-14A-RELATED 2 1258 IPR030109 GO:0008017|GO:0009904
Cca06g00886 1284 MobiDBLite consensus disorder prediction 830 850 - -
Cca06g00886 1284 SMART kinesin_4 132 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g00886 1284 MobiDBLite consensus disorder prediction 1 51 - -
Cca06g00886 1284 MobiDBLite consensus disorder prediction 1138 1160 - -
Cca06g00886 1284 Coils Coil 54 81 - -
Cca06g00886 1284 Gene3D Kinesin motor domain 79 450 IPR036961 -
Cca06g00886 1284 ProSiteProfiles Kinesin motor domain profile. 134 450 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g00886 1284 MobiDBLite consensus disorder prediction 651 683 - -
Cca06g00886 1284 Pfam Kinesin motor domain 142 449 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g00886 1284 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1258 - -
Cca06g00886 1284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 487 IPR027417 -
Cca06g00886 1284 MobiDBLite consensus disorder prediction 829 850 - -
Cca06g00886 1284 ProSitePatterns Kinesin motor domain signature. 350 361 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00886 Cca-Chr6 22246726 22280914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00886 121 451 Calmodulin-binding Proteins AT5G65930 37.681 5.65e-50 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00886 - - gmx:100810330 2204.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00886 06 22246726 22280914 Cca11g00741 11 13153473 13169209 PCT