Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00871 ATGGAGGACCAAAGGGAGAGAAAACCCAGAATCCTGTGCCTCCATGGATTCAGAACCAGTGGCCAAATCCTGAAGCAATTAGTCCTAAGGTGGCCAGAATCTGTGACACAAAAGCTGGACCTCGTCTTCCTGGACGCCCAGTTTCCCGCACAGGGAACATCCAGCGTTGAAGGCATTTTTGACCCTCCTTATTATGAATGGTTCCAAGCCAATGAGGACTTCTCCCAGTATACCAACTTCGAAGAATGTTTAACATACATCGAAGATTTCATGCTCAACAATGGTCCTTTCGATGGTATACTTGGCTTCTCTCAGGGAGCAATTTTAGCGGCTGCAATACCAGGAATGCAAACCCAGGGTGTGGCACTTGGGAAGGTAAACAAGATCAAGTTTGTGATTGTGATATCAGGAGCCAAGTTTGGTGGAAACAAGTTTGGAATGCCTAAACTGGCTTGCAATACATTTTCAAAACCAATTGATTGCCCGTCCCTTCACTTGATAGGGGAGAAGGATTTCATGCAGTCAGAGAACATTGCTTTGTTGGAAGCATTCGAGAATCCTGTTGTGATTCACCACCCTGGAGGGCATACAGTCCCCAGACTTGTTGATGAAAGTCTTGAAATTATGAAGCTGGACCTTGTTTTCCTCGATGCCCCGTTTCCCGTTGAGGGAACTTCTGGTATTGAAGGCTATGAATGGTTCCATGCCAATGAGGACTTCACTGAGTATACCAACTTCGAAGAAGGTTTAGAATTCATCCAAGACTACATGCTGGAAAATGGTCGGTTCGATGGCATCATGGGTTTCTCTCAGGGAGCACTTTTAGCGGCTGCGATGCCAGGAATGCAAGCACATGGCGTAGCACTTGCGAAGGTAGACAAGATCAAGTTGGTGATTGTGATCTCAGGAGCCAAGTTTGGTGGAAAGATGTTTGGAATGCCTGAACTTGCTAAAGATGCATTCTCCAAAATAATAGATATCCCGTCCCTTCACTTTATAGGGAAGACGGATATAGCGAGGCCAGAGCATAGTGTTTTGTTGGAAGCATTCAAGGATCCTGTTGTGATTTTCCACCCTGAAGGCCACACAGTTCCCAAACTTGATCATGGCAAGAGTCTTGAAACTGTGCTTGGTTTCATTGACACGATTCAGACACTGGTGAAAGATATAATGTACCAATTATACAAGGCCACGAAGAGCAGCCTAAGGAGTATTACTCCAAAAGAAATAAAGCTACTCAAGCATTTGTTAAACATCATAGATCCCGAAGAGCGTTTCTCTGCATTGGCAACAGCTTTCTCCCCTGGTGACGAACTCGAAGCCAAGGACCCTAATACTCTGTACACCACCCCAAAGGAGCTGCACAAGTGGATTAAGATCATGCTCGATGCATATCATCTGAACAAGGAAGAAACAGATTTGAGAGAAGCCAAGCAGATGACTGACCCTGTGGTAATTCAGAGGCTGTTTATCCTCAAAGATACTATTGAACAAGAATATATGGAAAAGGGTACACCTCAGAAGTCTGAAACGAAAGATGACTCTAAATCAAAAGAAGAGTTTTAA 1566 0.4451 MEDQRERKPRILCLHGFRTSGQILKQLVLRWPESVTQKLDLVFLDAQFPAQGTSSVEGIFDPPYYEWFQANEDFSQYTNFEECLTYIEDFMLNNGPFDGILGFSQGAILAAAIPGMQTQGVALGKVNKIKFVIVISGAKFGGNKFGMPKLACNTFSKPIDCPSLHLIGEKDFMQSENIALLEAFENPVVIHHPGGHTVPRLVDESLEIMKLDLVFLDAPFPVEGTSGIEGYEWFHANEDFTEYTNFEEGLEFIQDYMLENGRFDGIMGFSQGALLAAAMPGMQAHGVALAKVDKIKLVIVISGAKFGGKMFGMPELAKDAFSKIIDIPSLHFIGKTDIARPEHSVLLEAFKDPVVIFHPEGHTVPKLDHGKSLETVLGFIDTIQTLVKDIMYQLYKATKSSLRSITPKEIKLLKHLLNIIDPEERFSALATAFSPGDELEAKDPNTLYTTPKELHKWIKIMLDAYHLNKEETDLREAKQMTDPVVIQRLFILKDTIEQEYMEKGTPQKSETKDDSKSKEEF 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00871 521 SUPERFAMILY alpha/beta-Hydrolases 5 201 IPR029058 -
Cca06g00871 521 MobiDBLite consensus disorder prediction 501 521 - -
Cca06g00871 521 PANTHER ESTERASE AGAP003155 1 209 - -
Cca06g00871 521 SUPERFAMILY alpha/beta-Hydrolases 248 382 IPR029058 -
Cca06g00871 521 Gene3D alpha/beta hydrolase 5 206 IPR029058 -
Cca06g00871 521 Gene3D alpha/beta hydrolase 207 385 IPR029058 -
Cca06g00871 521 PANTHER ESTERASE AGAP003155 208 387 - -
Cca06g00871 521 Pfam Serine hydrolase (FSH1) 208 368 IPR005645 -
Cca06g00871 521 Pfam Serine hydrolase (FSH1) 7 201 IPR005645 -
Cca06g00871 521 PANTHER OVARIAN CANCER GENE-2 PROTEIN-RELATED 208 387 - -
Cca06g00871 521 PANTHER OVARIAN CANCER GENE-2 PROTEIN-RELATED 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00871 Cca-Chr6 21970706 21981247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00871 241 394 Sulfurtransferasese or Rhodanese AT1G09280 29.487 3.51e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00871 - - gmx:100794918 351.288