Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00848 ATGAAAATGTCACGAATCTTCCTGGCCACCCTCTCCCTGTTGCTCTTGTTCCTCGTGGCTTCTTCCAAGGAGGAGGGACCTCCCAAACTGCCATTCCACTTTCATTCTCTGTTTCCATTTCTTGGTCATTCCGACGATCTTCCACAAATTAACCCGCAGGACGTACCACCTGTAGATCAGAAAATACCTGTAGTGTCTAATAGCCTCAAAATAGACTTCTACAAATTTAGTTGCCCCAACGCAGAAAAAATTATCGCAGACACTGTTGCTGAGATGGAAAAGAGCAATTCGGACACAATCGCCAATTTCATTCGCCTTCAATTCCATGACTGCTTCGTTAATGGATGTGATGCATCGATCTTGCTGGATTACTCACCAACTGGTGACAAAGTGGAGAAAAGTTCAATGTTCAATGGTCTACTCCTGAAAGGAGCTGATCTGATTGATGAAATTAAGACAAGGCTGGAGAAGCAGTGTCCTGGAGTGGTTTCATGTGCTGACATATTGTCATTTGCAACGAACGAGGCAATGACACTAGGAGGCTTGCCCCCTCGGAAGCCCCTAGGTGGTCGAAGAGACGCCATTATTTCCCTTGCAACCGTTGCAGAAGCCAACAACCTTCCTTTACCAGACTGGACCATGGACCAAATGATAGAACTCTTCGAAAGGAAGGGCTTCAGCGTGGAAGAAATGGTGATCCTACTCGGTGCACATTCTGTTGGTATTGCTCATTGCGATGCCTTCATGGAAAGGGCTTACAACTTCAGAGCTACTGGGAAACCTGACCCTACCCTCACTTTGGAAGTGGTTGAGGAAATCAAAAAGGCGTGCCCTGGCGCTGGCACACCTCAGTATAGGAACCCCCCAGTGAACTTTGATCCCACCCCAACTGTGCTTGATAACCTCTTTTTTAGAGAGATGGTGGACAGAAGGAAAACATTGCTCATTACGGATTCCCATTTGTTGGAAGATCCCAGGACTTTCCCAATTGTGCAAAAGTTGGCGACTGACCCTGACATGTTCCCAAAGAGGTTTCCTGAGGTCATGACTAAGCTGAGTTCTTTGAATGTGCTCATGGGGAAGGAAGGGGAGATCAGGAAGATTTGTAGGTCCACCAATGTTTAA 1125 0.4667 MKMSRIFLATLSLLLLFLVASSKEEGPPKLPFHFHSLFPFLGHSDDLPQINPQDVPPVDQKIPVVSNSLKIDFYKFSCPNAEKIIADTVAEMEKSNSDTIANFIRLQFHDCFVNGCDASILLDYSPTGDKVEKSSMFNGLLLKGADLIDEIKTRLEKQCPGVVSCADILSFATNEAMTLGGLPPRKPLGGRRDAIISLATVAEANNLPLPDWTMDQMIELFERKGFSVEEMVILLGAHSVGIAHCDAFMERAYNFRATGKPDPTLTLEVVEEIKKACPGAGTPQYRNPPVNFDPTPTVLDNLFFREMVDRRKTLLITDSHLLEDPRTFPIVQKLATDPDMFPKRFPEVMTKLSSLNVLMGKEGEIRKICRSTNV 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00848 374 PRINTS Haem peroxidase superfamily signature 100 114 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00848 374 PRINTS Haem peroxidase superfamily signature 163 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00848 374 PRINTS Haem peroxidase superfamily signature 181 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00848 374 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00848 374 PRINTS Haem peroxidase superfamily signature 292 307 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00848 374 PRINTS Plant peroxidase signature 78 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00848 374 PRINTS Plant peroxidase signature 102 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00848 374 PRINTS Plant peroxidase signature 143 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00848 374 PRINTS Plant peroxidase signature 162 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00848 374 PRINTS Plant peroxidase signature 181 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00848 374 PRINTS Plant peroxidase signature 229 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00848 374 PRINTS Plant peroxidase signature 307 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00848 374 PRINTS Plant peroxidase signature 347 360 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00848 374 Pfam Peroxidase 88 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00848 374 ProSitePatterns Peroxidases proximal heme-ligand signature. 230 240 IPR019793 -
Cca06g00848 374 CDD secretory_peroxidase 69 372 IPR033905 GO:0004601|GO:0042744
Cca06g00848 374 Gene3D - 72 373 - -
Cca06g00848 374 PANTHER PEROXIDASE 56 371 - -
Cca06g00848 374 ProSiteProfiles Plant heme peroxidase family profile. 68 373 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00848 374 PANTHER PEROXIDASE 25-RELATED 56 371 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00848 374 Gene3D Peroxidase, domain 2 208 352 - -
Cca06g00848 374 SUPERFAMILY Heme-dependent peroxidases 69 373 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00848 Cca-Chr6 21657396 21659434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00848 63 373 Peroxidase AT3G03670 40.446 8.05e-73 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00848 K00430 - gmx:100802856 501.901