Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00800 ATGGAAGAACATCTCACTCCATTGGCTGTTACTCATCTCCTTCAACACACTCTCAGAAGTTTGTGCATCCATGAAAATTCTCAATGGGTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCTCCCAAGTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAATTGGATATTGGTGTGGGAAGATGGTTTCTGCAATTTTGCTGCCTCGGCCGCACCTGAAATTAACTCTGGCGATTGTCCAACCTCCTCGGTTTATGGGAACTGTGAGTTTCAGCCCTACCAAGGGCTGCAACCGGAGCTCTTCTTCAAGATGTCACATGAGATCTACAACTATGGAGAAGGGTTGATAGGAAAAGTGGCTGCAGATCACAGCCACAAGTGGATATACAAAGAACCTAATGATCAAGAAATCAACTTCTTGTCAGCATGGCACAATTCAGCAGATTCGCACCCTAGGACATGGGAAGCTCAGTTCCTGTCTGGTATAAAGACCATAGCTCTCATTGCTGTAAGAGAAGGTGTTGTTCAATTAGGAGCTGTTCACAAGGTGATTGAAGACTTGAGCTATGTGGTTCTTCTGAGAAAAAAGTTCAGCTACATTGAGAGCATTCCTGGTGTGCTGTTGCCACATCCATCATCATCAGCATACCCCTACAAAGTAGAAGGAGGGTATGGAGTCCCAGAACAATGGCATTTCCAAGGTAACCAGCATCTTGCACCACAAGCTGAGTTATATGACCATCACTTCAACTTGCCACTCAAGATAACTCCTTCAATGAGTAGCCTTGAGGCACTTCTCTCTAAGCTCCCCTCAGTGGTACCACCATCTCAACCTTCACAACCACAGTCCCATCACCACCAAGTTTTGCCATCACCCCAAAGGCCATTGGAGTTCATGGGAATGCAAAAAGTGGCAAAGGAAGAGTTAGATGAAGAGGTATACAGACCAGAACTTGACATAGGTGAGAGTAGCAGCTCCATGCCAGGGTACCACCACCAACATCATTTCCATCAGCAACAAGATCAGAATAATGTAACTAGGAGTGGAGCCAACAACGGATTTTGA 1089 0.4573 MEEHLTPLAVTHLLQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASAAPEINSGDCPTSSVYGNCEFQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNDQEINFLSAWHNSADSHPRTWEAQFLSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYKVEGGYGVPEQWHFQGNQHLAPQAELYDHHFNLPLKITPSMSSLEALLSKLPSVVPPSQPSQPQSHHHQVLPSPQRPLEFMGMQKVAKEELDEEVYRPELDIGESSSSMPGYHHQHHFHQQQDQNNVTRSGANNGF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00800 362 MobiDBLite consensus disorder prediction 334 362 - -
Cca06g00800 362 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN 1 351 - -
Cca06g00800 362 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 351 - -
Cca06g00800 362 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 205 IPR025610 -
Cca06g00800 362 MobiDBLite consensus disorder prediction 280 301 - -
Cca06g00800 362 MobiDBLite consensus disorder prediction 328 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00800 Cca-Chr6 20912642 20914962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00800 15 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.292 2.79e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00800 - - vun:114173114 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00800 06 20912642 20914962 Cca06g00800 06 20912642 20914962 ECH