Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00799 ATGAAGGGCGCAGGGGTAACCACAGTGATGATAGTGGCACAGTTCTTGAGTGTGGGTTTGAACACTCTCATCAAAGCATCCATGTCCAGAGGAATGAGCCACTTCATTTTCGTTGCGTATTCAAACCTTCTCGCATTCTGTTTTCTGCTACTAGCATCCAAAATCCATCACAGAAACAAAACTCCTACACCAATCAATTACTCCATTATCTTGAGAATTTTCATTCTTAGCTTGCTCAGTGTTTCCATACAGACACTAACTTATACTGGACTTGGCTATACCACTCCCACTCTCACCTCAGCCATGGGGGATCTTACTCCAGCTTATACCTTCATAATTGCCATTATTTCCAGGATGGAAAAGCTGGATCTAAAAGTACGAAGCAGCCAGGCAAAATCCATTGGAACTGTGGTATCAATTGCAGGAGCATTAACTGTATCCTTATATAAAGGGTTGCCTATCACAAGTGTTGTCATGCCAAAATATCTGTTCCTCTCACAACAATCACTATGGCTATTAGGAGCCTTTTTTCTTTCAGCTGCTAGCTTTTTGGGTTCAGCCTCGCTTGTTATTCAGACATGGACTATGAAAGAGTATCCTGAGGAGCTAATGCTAACAACCATTTGTTGCGGTTTTGTTGTCATCCAATCTTTCATAGTAGCTTTCATTGCAGAGGAAAATCCAAAGGCATGGATACTTAAACCCGATATGGAGTTGATATCTATATTCTATTCGGCCATTTTTGTGATATCTGCGCGAAGTGTGGTTTACGCATGGGCGTGTCGAAAGAAAGGACCCGTGTATGTTGCTATGTTCAGTCCTTTAGGGATTGTCATTGCACTTGTCATGGGGGTTGTATTCTTGGGAGATGTTCTATATCTTGGAAGTATGATAGGAGCTGGTATAATAGCTATTGGGTTTTATGCTGTAATATGGGGTCAGGCCGAGGAGGAAAAAATGGGATGTGAAAAACATGGAAGCTGTAGCATCATCTCATCGTCTTCTTCTGAAGCCCCTCTTTTGGTGAACGAAAGAAAGGAGACAAGTTCTTTTGTATGA 1059 0.4183 MKGAGVTTVMIVAQFLSVGLNTLIKASMSRGMSHFIFVAYSNLLAFCFLLLASKIHHRNKTPTPINYSIILRIFILSLLSVSIQTLTYTGLGYTTPTLTSAMGDLTPAYTFIIAIISRMEKLDLKVRSSQAKSIGTVVSIAGALTVSLYKGLPITSVVMPKYLFLSQQSLWLLGAFFLSAASFLGSASLVIQTWTMKEYPEELMLTTICCGFVVIQSFIVAFIAEENPKAWILKPDMELISIFYSAIFVISARSVVYAWACRKKGPVYVAMFSPLGIVIALVMGVVFLGDVLYLGSMIGAGIIAIGFYAVIWGQAEEEKMGCEKHGSCSIISSSSSEAPLLVNERKETSSFV 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00799 352 Pfam EamA-like transporter family 173 311 IPR000620 GO:0016020|GO:0016021
Cca06g00799 352 Pfam EamA-like transporter family 10 147 IPR000620 GO:0016020|GO:0016021
Cca06g00799 352 PANTHER WAT1-RELATED PROTEIN 14 316 - -
Cca06g00799 352 PANTHER WAT1-RELATED PROTEIN 14 316 IPR030184 GO:0016021|GO:0022857
Cca06g00799 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00799 Cca-Chr6 20851210 20855850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00799 8 347 Nodulin-like Gene Family AT3G28050 40.563 3.17e-77 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00799 - - gmx:100792641 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00799 06 20851210 20855850 Cca06g00799 06 20851210 20855850 ECH