Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00798 ATGGTGGGATGGGTGAATGGTTGGAGCAAATTATTGCCATTTGTGGGAATGGTGGTGGCTATGATGGCTCAAAGTGGAAGCAATGTGGTAATCCAAGTTGCCATGGCTGATGGGATCAACAAATATGTCATGGTTGTTTACTCTATGGCACTATCCACCAtcttgcttcttccctttctattctttctccacaggttctctttctttcttcctttTGAAGGAAATATATATATATACCTTGTTTCAAAGAACAAACATATTTGTATAATATCCCTTTTTATTAGCAGCTCAGAGCGTCCTCCTCTCACATTCTCTGTACTTTGCTCCTTCTTTTTGCTTGCACTCTTTGGGAGTTTAGGACAGATAATGGCATATATTGGCATAGATCTCAGCTCGGCTACTCTTGCCTCAGCCACGCTTAATCTCATTCCAGCTTTCACTTTCGTACTTGCTGTCATTTTCAGGATGGAAGTAGTACATTGGACACATTATAGCAGTCAAGCTAAAGTGTTGGGAACAATAGTATCAATTGCTGGAGCATTTATTATGATACTTTACAAGGGCCCAACCATCTTGAAGACACATTTGTCAGACTCTTCTAACAAACTTCAATTTTCACCACAATTAAACTGGATCATGGGAGGGATCTTCTGTGTTGGCGATTCTTTAGCGTCTTCCATGTGGTACATATATCAGGCTTCGGTTGTAAAGAAATACCCTGCTGTAACAGTCATAGTCTTCTTCCAAATCTTATTTTCAACCGTTCAGTGCACAGTATTTGCCTTAATTGCAGTCAGAGATCCAAGAGAATGGCGGGTGAAGTTGGATATGGAGTTGATTGGTATCGTATATCAGGCAATAGGTGCAACATTGATACGTTACATGCTGTGCACGTGGTGCGTCTTTAGAGCTGGACCTTTGTTTTGTGCAATGTTCAAGCCTGTGGGAATCATCTTCACCGTTTTCATGGGTGTAATCTTTCTTGGGGATGATTTCGGCCTTGGAAGTTTGATCGGTGCGGTTATAATCGTGGCAGGATTTTACACTGTTCTGTGGGGAAAATCGAGAGGAGAGAACAACAATGAAAATTTGGAGTCATCGTGCCATAATGCTCCTTTATTACAAAATACGGCGTAA 1137 0.3931 MVGWVNGWSKLLPFVGMVVAMMAQSGSNVVIQVAMADGINKYVMVVYSMALSTILLLPFLFFLHRFSFFLPFEGNIYIYLVSKNKHICIISLFISSSERPPLTFSVLCSFFLLALFGSLGQIMAYIGIDLSSATLASATLNLIPAFTFVLAVIFRMEVVHWTHYSSQAKVLGTIVSIAGAFIMILYKGPTILKTHLSDSSNKLQFSPQLNWIMGGIFCVGDSLASSMWYIYQASVVKKYPAVTVIVFFQILFSTVQCTVFALIAVRDPREWRVKLDMELIGIVYQAIGATLIRYMLCTWCVFRAGPLFCAMFKPVGIIFTVFMGVIFLGDDFGLGSLIGAVIIVAGFYTVLWGKSRGENNNENLESSCHNAPLLQNTA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00798 378 PANTHER WAT1-RELATED PROTEIN 88 369 IPR030184 GO:0016021|GO:0022857
Cca06g00798 378 PANTHER WAT1-RELATED PROTEIN 12 74 IPR030184 GO:0016021|GO:0022857
Cca06g00798 378 Pfam EamA-like transporter family 214 351 IPR000620 GO:0016020|GO:0016021
Cca06g00798 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 271 356 - -
Cca06g00798 378 PANTHER WAT1-RELATED PROTEIN 88 369 - -
Cca06g00798 378 PANTHER WAT1-RELATED PROTEIN 12 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00798 Cca-Chr6 20841842 20844963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00798 10 376 Nodulin-like Gene Family AT3G28050 37.859 3.84e-69 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00798 - - ccaj:109800829 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00798 06 20841842 20844963 Cca06g00798 06 20841842 20844963 ECH