Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00795 ATGGTTTATAGCTTCCATGCAGAAACCCTGCTTTTTATAAACTGGCTAAAAATTAGTAAATTTGATTCAACATACTATATAACAAGTCTCCTTCTGAAGGTCGTAGCAATCAAGAAAATGGAGTTGCCAGCAATTAAAGCAGCAGAGGGGGAACGTGAGTTTCGTGTTGAAGTTGACATCTTGAGCAGACTAGACCACCCAAATCTTGTTTCTTTGATAGGCTACTGTGCTGATGGAAAGCATAGATTCCTAGTATATGAATATATGCGCAATGGGAACCTGCAAGATCATTTGAATGGAATTGGAGATAGAAACATGGATTGGCCTCGAAGACTCAAGGTGGCACTAGGAGCTGCAAAAGGGCTTGCTTATCTCCATTCAAGTTCCGATGTTGGAATTCCTATTGTTCATAGGGACTTCAAATCGACCAATATTCTCTTAGATGAGAACTTTGAAGCAAAGATATCTGATTTTGGGCTTGCCAAGTTAATGCCAGAAGGACAGGAGACACATGTGACTGCCAGAGTACTTGGTACCTTTGGCTATTTTGATCCTGAGTATACATCGACTGGGAAACTCACTCTACAAAGTGATGTTTATGCTTTTGGTGTTGTTCTTTTGGAGCTTTTAACTGGACGTCGAGCTGTAGATCTAAACCAAGGTCCCAATGATCAAAACCTTGTACTACAGGTCAGGCACATATTGAATGATCGCAAGAAGCTGCGCAAGGTGGTAGATCCAGAGATGGCTCGAAATTCTTACACCATTCAGTCTATAGTCATGTTTGCCAATCTGGCATCAAGATGTGTTCGTACTGAGAGTAATGAGAGACCTTCAATGGCAGAATGTGTAAAAGAACTCCTAATGATTATCTATACAAATTCAAAAGGCTTGGGAATGGTTATGCATAGTTTGAGAATGATCTAG 927 0.4045 MVYSFHAETLLFINWLKISKFDSTYYITSLLLKVVAIKKMELPAIKAAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMRNGNLQDHLNGIGDRNMDWPRRLKVALGAAKGLAYLHSSSDVGIPIVHRDFKSTNILLDENFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHILNDRKKLRKVVDPEMARNSYTIQSIVMFANLASRCVRTESNERPSMAECVKELLMIIYTNSKGLGMVMHSLRMI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00795 308 ProSiteProfiles Protein kinase domain profile. 1 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g00795 308 PIRSF ILK 23 298 - -
Cca06g00795 308 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 20 308 - -
Cca06g00795 308 PANTHER OS01G0750732 PROTEIN 20 308 - -
Cca06g00795 308 Pfam Protein kinase domain 33 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g00795 308 Gene3D Transferase(Phosphotransferase) domain 1 90 298 - -
Cca06g00795 308 SUPERFAMILY Protein kinase-like (PK-like) 11 293 IPR011009 -
Cca06g00795 308 CDD STKc_IRAK 33 287 - -
Cca06g00795 308 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Cca06g00795 308 Gene3D Phosphorylase Kinase; domain 1 20 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00795 Cca-Chr6 20819901 20825175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00795 35 291 Receptor kinase-like Gene Family AT3G58690 47.710 8.86e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Cca06g00795 Pkinase 6.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00795 - - gmx:100796654 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00795 06 20819901 20825175 Cca06g00795 06 20819901 20825175 ECH