Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00788 ATGGAGTCGAAAAACCCTGGGAGGTTTACATTTGGGAAGCAGTTGTCGCTGGCACCGAAACACTGTAACGAGGAAGCGGAGCTTCAGAATGAGGGAGACGTTGTTGACCAGAGCGCGAGGTGGATGTATTCAGTGTTTGAAGGCGATGTGGATGGTATTTGCGAGGTGTTGGAGTCTGGGGTTAGTGTCAATTTCAAGGATATTGATTATCGCACTGCTCTTCATGTTGCTGTGTGTGAGGGATTCACTAAGGTCGTTGAGTTTTTGCTCCAGAAAGATGCCGAAGTTGACGCCAAGGATTGA 303 0.4818 MESKNPGRFTFGKQLSLAPKHCNEEAELQNEGDVVDQSARWMYSVFEGDVDGICEVLESGVSVNFKDIDYRTALHVAVCEGFTKVVEFLLQKDAEVDAKD 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00788 100 SUPERFAMILY Ankyrin repeat 40 100 IPR036770 -
Cca06g00788 100 Gene3D - 13 100 IPR036770 -
Cca06g00788 100 ProSiteProfiles Ankyrin repeat region circular profile. 69 100 - -
Cca06g00788 100 SMART ANK_2a 36 65 IPR002110 GO:0005515
Cca06g00788 100 SMART ANK_2a 69 98 IPR002110 GO:0005515
Cca06g00788 100 Pfam Ankyrin repeat 71 100 IPR002110 GO:0005515
Cca06g00788 100 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 12 100 - -
Cca06g00788 100 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 12 100 - -
Cca06g00788 100 ProSiteProfiles Ankyrin repeat profile. 69 100 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00788 Cca-Chr6 20767138 20767440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00788 1 100 MAP Kinase Kinase Kinase AT3G58760 42.727 1.87e-23 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00788 - - ccaj:109794064 171.785