Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00768 ATGAGTTCATCCTCCGAGAAGAAACCTTCCTCTTCTTCAGCGTTGAAGCTATTCGGTTTCCCCATAACTCATCCCACTGATAGCAATGGCCAAAGCAAGAAGTGTCGATTCTGCCATCGTGAGTTTCATAATTCGCAAGCGTTAGGGGGCCACCAAAATGCGCATAGAAGAGAAAGAAAAATGGCTAGGTTTGCCCAAATTGAATATATGCTTCCACATCAAGAAAACCAGATATTCCACGCGGTTACACCTCCCATGGTTGCACAAGAAGCATCAACAACCTATGTTTCTGGTGGTGCAACTCGGCTTTGGACACATGATGAGTCATCACAAAAGCTACCTGTGGCACAACCACCAAGTACGTGCCACCTAGTAGTAGGGGTTGATGACAATATCGATCTAGAACTGAGGCTATCTTCTAAGAAATATGGGATGTGA 438 0.4498 MSSSSEKKPSSSSALKLFGFPITHPTDSNGQSKKCRFCHREFHNSQALGGHQNAHRRERKMARFAQIEYMLPHQENQIFHAVTPPMVAQEASTTYVSGGATRLWTHDESSQKLPVAQPPSTCHLVVGVDDNIDLELRLSSKKYGM 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00768 145 PANTHER ZINC FINGER PROTEIN 5 2 93 IPR044299 GO:0010090
Cca06g00768 145 PANTHER ZINC FINGER PROTEIN 6-LIKE 2 93 - -
Cca06g00768 145 ProSitePatterns Zinc finger C2H2 type domain signature. 35 55 IPR013087 -
Cca06g00768 145 SUPERFAMILY beta-beta-alpha zinc fingers 33 61 IPR036236 -
Cca06g00768 145 ProSiteProfiles Zinc finger C2H2 type domain profile. 33 60 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00768 Cca-Chr6 20302439 20302876 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00768 10 96 C2H2 Transcription Factor Family AT1G67030 36.538 1.55e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00768 - - ccaj:109793205 199.904