Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00761 ATGGCTTTGAATGTGATGCTTCTTCTTATTCTGAGCCTTGTTTTACAAGGTTTTGTAATACCAACCTGTCATAGCCAGACCAATACACCTCAGAACATTGAAACTTTCTATCCAACCCAAACTTCTGAACCAACCCTCACAACTCAACCTCCTGAGCTACCACCATCACCAGGACCAGTGGCTGCAACACAAACTTCTTCCTCATCATCCAGTAGAAAGGTAGCAAAAGCTGTGGCTGCAACTGCAGCAGGTACTGTAGTTCTTTCTGGTATGATTTTCCTCTTGGTTCAAAGGTGCTTCAGAGCAAGGAGGAGAAAGAAGGTGACAAACACTGCTTCTGCTGCAGAAAGGCGTGTGGTGCCTCAGGTACACGTGTTTGAGAGAATGGAGGGACATGTCAAGGGATTGATTGTTGATGAGGATGGTTTGGATGTGGTTTATTGGAGAAAGCTTGAAGGTAAAAACACAACAGACAAGGATTTCCAAAGGGGGGTCTTGCATAGCCCCAAAGACAAAGAAGAATATGATCATGGGAAAAGATCTGAGTCCATTCAAGAAATTTCTCTCCTTAGAGAGAGACCTTCATCTTCCCACATGAATATATTTCCTCCAGAAGATTCATATACAATCATGAGTATTCCACCACCTGCTCCTCCTATATTTCCTCCAGAAGAGTCACCATATACAATCATGAGAATtccacctcctgctcctcctcctAATGTTCCTTCATCATTTGGAAGCTCTTCTACAAAATCATTTTCTCCACCTTTTTCCCCTTCATCACCAAAACCATTCTCCAATTCTTTCTCATCAATTCCAAAAATGACAAATCCTTCACCACCTCAAACAACTCCTGATAAAAAGAATCAATTaccaacaccaacaccaccaccaccaATTCTTGGTGGAAAAAGCTcaccaccaccaccaccacctccaccaccaccaATCCAAAATAAAAAGAACTCAGCAGCACCACCTCCTCCACCACCAATTTCTGCTAGAAAGAGTCCAGCACCACCTCATCGTCCATCAAAGGCAAGTGGTATGAAGTCATCATCAAAACCACCACCTACCCCTATTGGAAGTGCATCAGTTACCTCAAGTAAGCAAGGCAACACTTCACCTGAGGTAAAACTGAAGCCCTTACATTGGGATAAGGTGAATACCAACCTTGATCACTCTATGGTGTGGGACAAACTTGGCCGTGGTTCTTTCAGGGTTGATGATGATCTTATGGAATCTCTCTTCGGGTATGTTGCCACCGGCCGAAATGATAATACCCCAAAAGTAAATAACTCAATCAGTCCTAGAAAGGATGGTTTGGCTCCATCAGCAAATGCTTCCCTTCTTGATCCCAGAAAATCACAAAATATTGCTATTGTTTTGAAGTCTCTGGCAGTCTCGCATATGGAAATTATTGATGCACTGACTGATGGTCATGGTCTTAACACAGACACCATTGAAAAGCTTGGCAGAGTAGCTCCAACAGAAGAAGAACAGATGCTTATACTTGCATATGAAGGAGACCCTTCAAAACTTGCTGCAGCAGAATCTTTCCTACATCACATCCTCAAAGTTGTTCCTTCAGCATTTAAGCGCTTGAATGCTTTATTATTCAGGTTGAATTATGATTCTGAAATGGTAGAAATCAAGGAGTTTTTGCATACCCTTGAGCTGGGGTGCAAGGAGCTTCGAAACCAAGGAATTTTTTTGAAGCTTCTCGAAGCAGTGCTTAAGGCTGGAAACCGCATGAACGCAGGCACTAACAGGGGTAATGCTCAAGCTTTCAACCTGGCTTCTCTAAGAAAGCTCTCTGATGTCAAGAGCACTGATGGAAAAACAACATTGCTCCACTTTGTGGTTGAAGAAGTAGTGCGTTCTGAAGGTAAACGCGCCGTACTTAACCGCAATCACAGTTTGAGTCGTAGTAGCAGCAGGAGCAGCAACAACAGTGGAGACTCGGAGAACTCTTCTGCTTCAAATGAACAAAGACAAAAGGAATATATAACACTAGGATTGCCAATTGTAGGAGGGATCAGTTCTGAGTTTACCAACGTAAAGAAGGTTGCGGTTGCAGATTACAACAGTTTTGTTGGCTCAATCTCAGCGCTCTCAGCCAGGATAGTTGAGACTAGAGAACTTGTTTCCCAGTGTGGAAATGATAAGGGAGGAAACTTTGTGAGAGAAATGAACCATTTTCTTGAAAATGCTGAGGAGGAACTTCGGTTAGTGAGGGAGGAGCAAACAAGGGTAATGCAACTTATGAAAAGAACAATAGAATATTATCAAGGGGGAGCTTCAAAAGATAGTGCACAACCTTTTTATCTATTTGTCATAGTTAAGGATTTTCTGGGAATGGTTGATCAAGCATGCATTGAGATTGCTCGTAACATGCAAAAGAGGAAGACACCTAAGGTTATCCAAGTCTAG 2436 0.408 MALNVMLLLILSLVLQGFVIPTCHSQTNTPQNIETFYPTQTSEPTLTTQPPELPPSPGPVAATQTSSSSSSRKVAKAVAATAAGTVVLSGMIFLLVQRCFRARRRKKVTNTASAAERRVVPQVHVFERMEGHVKGLIVDEDGLDVVYWRKLEGKNTTDKDFQRGVLHSPKDKEEYDHGKRSESIQEISLLRERPSSSHMNIFPPEDSYTIMSIPPPAPPIFPPEESPYTIMRIPPPAPPPNVPSSFGSSSTKSFSPPFSPSSPKPFSNSFSSIPKMTNPSPPQTTPDKKNQLPTPTPPPPILGGKSSPPPPPPPPPPIQNKKNSAAPPPPPPISARKSPAPPHRPSKASGMKSSSKPPPTPIGSASVTSSKQGNTSPEVKLKPLHWDKVNTNLDHSMVWDKLGRGSFRVDDDLMESLFGYVATGRNDNTPKVNNSISPRKDGLAPSANASLLDPRKSQNIAIVLKSLAVSHMEIIDALTDGHGLNTDTIEKLGRVAPTEEEQMLILAYEGDPSKLAAAESFLHHILKVVPSAFKRLNALLFRLNYDSEMVEIKEFLHTLELGCKELRNQGIFLKLLEAVLKAGNRMNAGTNRGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRAVLNRNHSLSRSSSRSSNNSGDSENSSASNEQRQKEYITLGLPIVGGISSEFTNVKKVAVADYNSFVGSISALSARIVETRELVSQCGNDKGGNFVREMNHFLENAEEELRLVREEQTRVMQLMKRTIEYYQGGASKDSAQPFYLFVIVKDFLGMVDQACIEIARNMQKRKTPKVIQV 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00761 811 MobiDBLite consensus disorder prediction 31 71 - -
Cca06g00761 811 MobiDBLite consensus disorder prediction 31 47 - -
Cca06g00761 811 Gene3D Formin, FH2 domain 381 808 IPR042201 -
Cca06g00761 811 MobiDBLite consensus disorder prediction 286 339 - -
Cca06g00761 811 MobiDBLite consensus disorder prediction 638 665 - -
Cca06g00761 811 PANTHER FORMIN-LIKE PROTEIN 4 297 807 - -
Cca06g00761 811 PANTHER FORMIN-LIKE PROTEIN 4 6 311 - -
Cca06g00761 811 SUPERFAMILY Formin homology 2 domain (FH2 domain) 327 804 - -
Cca06g00761 811 SMART it6_source 371 804 IPR015425 -
Cca06g00761 811 PANTHER FORMIN-RELATED 6 311 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cca06g00761 811 MobiDBLite consensus disorder prediction 637 665 - -
Cca06g00761 811 MobiDBLite consensus disorder prediction 348 377 - -
Cca06g00761 811 MobiDBLite consensus disorder prediction 215 243 - -
Cca06g00761 811 Pfam Formin Homology 2 Domain 375 789 IPR015425 -
Cca06g00761 811 Coils Coil 729 756 - -
Cca06g00761 811 MobiDBLite consensus disorder prediction 264 285 - -
Cca06g00761 811 MobiDBLite consensus disorder prediction 215 383 - -
Cca06g00761 811 ProSiteProfiles Formin homology-2 (FH2) domain profile. 371 811 IPR015425 -
Cca06g00761 811 PANTHER FORMIN-RELATED 297 807 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00761 Cca-Chr6 20210523 20213624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00761 353 805 FH2 protein (formin) Gene Family AT1G70140 56.388 2.50e-176 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00761 - - gmx:100780368 1027.31