Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00746 ATGAGCGAGCGAGTTCCTTCGTCGCGGACGATTCGACTCGGCCGAGTCCAGCCTCAAGCTCCTGGTCACCGCACCATCTTCTGCAACGATCGCCAAGCCAATCTTCCCGTTCGCTTCAAGGGGAATTCAATATCGACTACAAAGTACAACTTCTTCACTTTTCTGCCAAAAGGATTGTTTGAACAGTTCAGGCGGGTTGCTAATCTCTACTTTCTTGCAATCTCAATTTTGTCAACCACACCAATCAGCCCCCTCTCTCCAATAACTAATGTGATTCCTCTGTCTCTGGTGCTTCTCCTCTCTCTCATAAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAAAATGACATGTCTGTAAACAATAATACAATACATGTTTTGCAAGATCAAAAGTGGGTGTCTATACCCTGGAAAAAGTTGCAAGTTGGTGATGTTGTCAAGGTTGAGCAAGATGGATTCTTCCCTGCAGATCTGCTTTTCCTGGCTAGTACGAATGTAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGATGGTGAAACCAATTTGAAGATTAGGAAAGCATTGGAGAAGACTTGGGATTACCTGACTCCAGAGAAGGCATCTGAATTTAAAGGTGAAATTCAGTGCGAACAACCAAACAATTCATTGTATACCTTCACTGGAAATCTTTCAATTCAAAACCAAATACTTCCTGTCAGTCCAAACCAACTTCTGTTGCGAGGATGCAGTCTCAGGAATACAGAGTATGTTGTTGGGGTTGTTATTTTTACAGGACATGAAACAAAGGTGATGATGAATGCTATGAATGTTCCTTCCAAAAGAAGTACACTGGAGAGGAAGCTTGACAAGCTCATACTTGCTCTATTTGTGACTCTCTTTATGATGTGTTTCATTGGAGCTGTTGGCAGTGCTATCTTTGTAAACAAGAAGTATTTCTATTTACATCTTGAATCATCAGAGGAGGGCTCAGAACAGTTCAACCCAAGAAACAGATTTATTGTTTTCCTTCTCACTATGTTTACCCTAATCACTTTGTATTCCACAATCATCCCCATTTCACTTTATGTATCAGTAGAGATGATTAAATTTATTCAGTCCACTCAGTTTATCAACAAGGACTTGCACATGTACCATTATGAGACTAATACCCCAGCGTTGGCCAGAACTTCAAATCTGAATGAAGAACTTGGGCAGGTGGAATACATCTTCTCAGACAAAACTGGCACTCTGACAAGAAACTTAATGGAGTTCTTTAAGTGTTCAATTGGAGGAGAAGTTTATGGAAAGGGATTGACTGAAATTGAGAAGGGAATAACAGAGCGTAGTGGCTTAAAGTTTGAGGAAAATATATCACTCAATGCATTGCGAGAGAGGGGCTTTAATTTTGATGATGCTAGGCTTATGAGAGGAGCTTGGAGGAATGAGCCGAATCCTGATAGCTGCAAGGAATTCTTCAGATGTCTTGCTATATGCCATACTGTGCTTCCTGAGGGCGAAGAGACCCCTGAGAAGATCAAATATCAAGCTGCATCACCTGATGAGGCTGCTTTGGTTATTGCTGCGAAGAACTTTGGTTTTTTCTTTTTCAGACGCACTCCTACAATGATATATATTCGTGAATCTCATGTTGAGAAGATGGGTAAAATTCAAGATGTATCATATGAGATTTTGAATGTGCTTGAGTTTAACAGTACAAGGAAGCGCCAGTCTGTTGTGTGTCGTTATCCAGATGGGAGGCTTGTATTGTACTGCAAGGGTGCTGATAATGTAATATATGAGAGGTTAGCTGATGGCTATAATGATATAAAAAAAGTGACTAGGGAACACTTGGAGCAATTTGGGTCTGCTGGTCTCCGGACATTATGCCTGGCCTACAAAGAATTACATCCTGATGTTTATGAAAGCTGGAATGGGAAGTTCGTCCAAGCCAAATCTTCTCTACATGATCGTGAAAAAAAGTTAGATGAGGTGGCAGAACTTATAGAAAATGATCTTGTTTTGATTGGTAGCACTGCCATAGAAGATAAGCTTCAAGAGGGAGTACCAGCCTGCATAGAGACTCTTCAAAGAGCCGGCATTAAAATTTGGGTGCTTACAGGGGACAAGGTTGAAACAGCAGTTAATATTGCCTATGCATGCAATTTAATAAACAATGAGATGAAGCAATTTATTATCAGTTCAGAAACTGACGTGATTAGAGAAGTTGAAGACAGGGGGGACCAAGTAGAAATTGCACGATTTATTAAAGAAGAAGTGAAGAAAGAACTGAAGAAATGCCTCGAAGAAGCACAGAGCTATTTTATCTCTCTATCTGGACCAAAATTAGCACTTGTAATTGATGGAAAATGTCTCATGTATGCATTGGATCCTAGTTTGAGAGTCATGCTACTGAATTTGAGCATGAACTGCCATGCTGTTGTTTGCTGCCGAGTCTCTCCTTTACAGAAAGCACAGGTCACAAGTTTGGTTAAAAAGGGGGCACAGAAAATAACACTTAGCATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTATTGGCATAAGTGGGTTGGAAGGGATGCAAGCTGTGATGGCTAGTGATTTT 2604 0.4086 MSERVPSSRTIRLGRVQPQAPGHRTIFCNDRQANLPVRFKGNSISTTKYNFFTFLPKGLFEQFRRVANLYFLAISILSTTPISPLSPITNVIPLSLVLLLSLIKEAFEDWKRFQNDMSVNNNTIHVLQDQKWVSIPWKKLQVGDVVKVEQDGFFPADLLFLASTNVDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEIQCEQPNNSLYTFTGNLSIQNQILPVSPNQLLLRGCSLRNTEYVVGVVIFTGHETKVMMNAMNVPSKRSTLERKLDKLILALFVTLFMMCFIGAVGSAIFVNKKYFYLHLESSEEGSEQFNPRNRFIVFLLTMFTLITLYSTIIPISLYVSVEMIKFIQSTQFINKDLHMYHYETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGKGLTEIEKGITERSGLKFEENISLNALRERGFNFDDARLMRGAWRNEPNPDSCKEFFRCLAICHTVLPEGEETPEKIKYQAASPDEAALVIAAKNFGFFFFRRTPTMIYIRESHVEKMGKIQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADNVIYERLADGYNDIKKVTREHLEQFGSAGLRTLCLAYKELHPDVYESWNGKFVQAKSSLHDREKKLDEVAELIENDLVLIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKVETAVNIAYACNLINNEMKQFIISSETDVIREVEDRGDQVEIARFIKEEVKKELKKCLEEAQSYFISLSGPKLALVIDGKCLMYALDPSLRVMLLNLSMNCHAVVCCRVSPLQKAQVTSLVKKGAQKITLSIGDGANDVSMIQAAHVGIGISGLEGMQAVMASDF 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00746 868 SFLD p-type atpase 386 868 IPR044492 -
Cca06g00746 868 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 808 867 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cca06g00746 868 ProSitePatterns E1-E2 ATPases phosphorylation site. 406 412 IPR018303 -
Cca06g00746 868 SUPERFAMILY Calcium ATPase, transduction domain A 121 265 IPR008250 -
Cca06g00746 868 SUPERFAMILY HAD-like 392 862 IPR036412 -
Cca06g00746 868 Gene3D - 668 868 IPR023214 -
Cca06g00746 868 SFLD Haloacid Dehalogenase 386 868 - -
Cca06g00746 868 SUPERFAMILY Calcium ATPase, transmembrane domain M 37 398 IPR023298 -
Cca06g00746 868 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 410 682 IPR023299 GO:0000166
Cca06g00746 868 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 39 868 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cca06g00746 868 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 7 868 - -
Cca06g00746 868 Pfam Cation transport ATPase (P-type) 501 595 - -
Cca06g00746 868 Pfam Phospholipid-translocating ATPase N-terminal 26 90 IPR032631 -
Cca06g00746 868 CDD P-type_ATPase_APLT_Dnf-like 41 868 - -
Cca06g00746 868 Gene3D - 104 269 - -
Cca06g00746 868 PRINTS P-type cation-transporting ATPase superfamily signature 404 418 - -
Cca06g00746 868 PRINTS P-type cation-transporting ATPase superfamily signature 835 854 - -
Cca06g00746 868 Gene3D - 532 667 IPR023299 GO:0000166
Cca06g00746 868 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 7 868 - -
Cca06g00746 868 Pfam E1-E2 ATPase 120 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00746 Cca-Chr6 19972264 19991068 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00746 3 868 Primary Pumps ATPases AT1G59820 80.161 0.0 1482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00746 K14802 - gmx:100815547 1579.3