Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00737 ATGGCTAAAAACGACCTAAAGCTTTTGGGTGGTTGGTTCAGTCCATTTGCCCTAAGGGTGCAGGTTGCCCTTAACCTCAAGGGTCTAGATTATGAGGTTGTTGAACAGACTTTGAGTCCCAAAAGCGAGTTGCTTCTTAAGTCCAACCCAGTGCACAAGAAAATACCGGTTCTCCTCCATGCAGATCATAAACCTATCTGTGAATCTTTAATCATAGTTGAGTACATTGATGAGGTTTGGACCAATGCTCCCTCCATCCTTCCACAAAAACCCTATGATCGAGCTAATGCACGATTTTGGCTTTCTTACATTGATGACAAGTTGCTTACGTCCACCAAAAGTATTCTAATGGCTGAAGATGATGAAGCAAAGAAGCCACACTTGGAGCAAATAGAAGAAGTTCTAGAGAAGATGGAAGAAGTGTTCAACAAGTACAGTGAAGGGAAGGCCTTTTTCGGAGGAGATACGATTGGACTCATTGATATTGGTTTCGGGAGTTTCATGAGTTGGATAAGAGTCACAGAGGACATAATTGGAATAAAAGTGCTTGATGAAGCCCGGAACCCTAGTTTGGCCCAATGGGCTCAATCGTTCGCTGCTCATCCTTCTGTGAAGGGCCTTTTACCAGAGACTCCCAAGCTTACTGAGTTTGCCAAGCTTCTTATACTACAATGGACTGCATCTGCAAGGTTGTTATTTCTTGTGTTTCACCTATTTAAGCCCGAAAACCATAACCAAACATTTTGA 747 0.4284 MAKNDLKLLGGWFSPFALRVQVALNLKGLDYEVVEQTLSPKSELLLKSNPVHKKIPVLLHADHKPICESLIIVEYIDEVWTNAPSILPQKPYDRANARFWLSYIDDKLLTSTKSILMAEDDEAKKPHLEQIEEVLEKMEEVFNKYSEGKAFFGGDTIGLIDIGFGSFMSWIRVTEDIIGIKVLDEARNPSLAQWAQSFAAHPSVKGLLPETPKLTEFAKLLILQWTASARLLFLVFHLFKPENHNQTF 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00737 248 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Cca06g00737 248 SUPERFAMILY GST C-terminal domain-like 78 221 IPR036282 -
Cca06g00737 248 CDD GST_N_Tau 6 80 - -
Cca06g00737 248 Pfam Glutathione S-transferase, C-terminal domain 99 202 IPR004046 -
Cca06g00737 248 SFLD Main.3: Omega- and Tau-like 2 227 IPR045073 -
Cca06g00737 248 Gene3D - 87 229 - -
Cca06g00737 248 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 84 IPR004045 -
Cca06g00737 248 SFLD Glutathione Transferase (cytosolic) 2 227 IPR040079 -
Cca06g00737 248 Coils Coil 128 148 - -
Cca06g00737 248 CDD GST_C_Tau 91 221 IPR045074 GO:0004364|GO:0006749
Cca06g00737 248 Gene3D Glutaredoxin 1 86 - -
Cca06g00737 248 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 219 IPR045073 -
Cca06g00737 248 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Cca06g00737 248 PANTHER GLUTATHIONE S-TRANSFERASE U17 5 219 - -
Cca06g00737 248 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 217 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00737 Cca-Chr6 19834498 19838394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00737 1 219 Glutathione S-transferase Gene Family AT1G10370 55.455 1.73e-84 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00737 K00799 - gmx:547576 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00737 06 19834498 19838394 Cca06g00737 06 19834498 19838394 ECH