Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00725 ATGGTCCTGCCGGGCACGGGTATGCTTGCGTCGGGCGCGATGGCCCCTGGTGCTCTCTGGTTGTGCCACGCTGGGCGCGACCAGGATTGCGCCGGGCGCGGAGGAGATCTCCGAGATGATATGCGTGACGACACATTGTGTACTTATTGCTGCTTACGCGGTATAGTTGATGCTAGTTTGGTATGCCCCCTCTCTCCAATAACTAATGTGATTCCTCTGTCTCTGGTGCTTCTCCTCTCTCTCATAAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAAAATGACATGTCTGTAAACAATAATACAATACATGTTTTGCAAGATCAAAAGTGGGTGTCTATACCCTGGAAAAAGTTGCAAGTTGGTGATGTTGTCAAGGTTGAGCAAGATGGATTCTTCCCTGCAGATCTGCTTTTCCTGGCTAGTACGAATGTAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGATGGTGAAACCAATTTGAAGATTAGGAAAGCATTGGAGAAGACTTGGGATTACCTGACTCCAGAGAAGGCATCTGAATTTAAAGGTTTAATTTTTTTTATTGATTGA 576 0.4601 MVLPGTGMLASGAMAPGALWLCHAGRDQDCAGRGGDLRDDMRDDTLCTYCCLRGIVDASLVCPLSPITNVIPLSLVLLLSLIKEAFEDWKRFQNDMSVNNNTIHVLQDQKWVSIPWKKLQVGDVVKVEQDGFFPADLLFLASTNVDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGLIFFID 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00725 191 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 59 187 - -
Cca06g00725 191 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 59 187 - -
Cca06g00725 191 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 68 167 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cca06g00725 191 SUPERFAMILY Calcium ATPase, transduction domain A 100 171 IPR008250 -
Cca06g00725 191 Gene3D - 83 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00725 Cca-Chr6 19709433 19712391 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00725 61 187 Primary Pumps ATPases AT1G59820 78.740 4.21e-70 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00725 K14802 - gmx:100815547 224.172