Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00697 ATGGTTGTTGCTGTAAAGAGGCTTAAGCCTGAAGGTTTTCAAGGTCATAAGGAGTGGTTGACTGAGGTTAACTACCTTGGACAACTGCACCATCCTAATCTGGTTAAATTAATTGGATACTGCTTGGAGGGAGAGAACCGGCTTTTGGTCTACGAGTTTATGCCCAAAGGAAGCTTAGAGAACCATCTGTTTAGAAGAGGACCACAACCACTCTCTTGGCCAGTAAGGATGAAAGTGGCCATTGGTGCTGCCAGAGGACTCTCCTTTCTTCATAATGCCAAATCACAAGTCATATACCGTGATTTCAAAGCTTCTAACATCCTACTAGATGCTGAGTTTAATGCTAAACTCTCGGACTTTGGTTTAGCTAAGGCGGGTCCTACTGGTGATAGAACTCATGTGTCTACTCAAGTCATGGGAACTCAAGGATATGCAGCACCTGAATATGTAGCCACTGGTCGCTTGACAGCCAAGAGTGATGTCTACAGCTTTGGAGTTGTGTTGCTTGAACTTTTATCCGGAAGGCGTGCCGTTGATAAAACAATAGCCGGTATGGAGCAGAATCTGGTGGATTGGGCAAAACCTTATCTAAGCGATAAACGAAGACTCTTCCGGATCATGGACTCCAAGTTGGAGGGCCAGTACCCTCAGAAGGGTGCCTTCATGGCTGCCACACTTGCCCTACAATGTCTCAACAGTGAGGCCAAGGCAAGGCCTCCAATGACAGAGGTTTTAGCAACTCTGCAACAGATAGAAGCCCCCAAAACTGCAGGCAGACACTCCCATTCAGAACACCACAGGGTCCAAACTCCTGTGAGAAAGTCTCCGGCACGGCCTCGGTCACCGTTGAATGTAACTCCTACTGCTTCCCCTCTGCCGGCTCACCGGCAATCGCCCCGTGTCCACTGA 909 0.484 MVVAVKRLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWPVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKTIAGMEQNLVDWAKPYLSDKRRLFRIMDSKLEGQYPQKGAFMAATLALQCLNSEAKARPPMTEVLATLQQIEAPKTAGRHSHSEHHRVQTPVRKSPARPRSPLNVTPTASPLPAHRQSPRVH 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00697 302 Pfam Protein tyrosine and serine/threonine kinase 2 247 IPR001245 GO:0004672|GO:0006468
Cca06g00697 302 SUPERFAMILY Protein kinase-like (PK-like) 2 247 IPR011009 -
Cca06g00697 302 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g00697 302 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC 1 300 - -
Cca06g00697 302 MobiDBLite consensus disorder prediction 257 271 - -
Cca06g00697 302 PIRSF ILK 1 268 - -
Cca06g00697 302 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Cca06g00697 302 PANTHER OS01G0588500 PROTEIN-RELATED 1 300 - -
Cca06g00697 302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 97 109 IPR008271 GO:0004672|GO:0006468
Cca06g00697 302 MobiDBLite consensus disorder prediction 254 302 - -
Cca06g00697 302 CDD STKc_IRAK 2 251 - -
Cca06g00697 302 Gene3D Transferase(Phosphotransferase) domain 1 55 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00697 Cca-Chr6 19085841 19090074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00697 1 248 Glycoside Hydrolase AT3G07070 56.972 2.18e-97 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Cca06g00697 PK_Tyr_Ser-Thr 4.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00697 - - gmx:100809778 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00697 06 19085841 19090074 Cca06g00697 06 19085841 19090074 ECH
Cca06g00697 06 19085841 19090074 Cca09g00208 09 4356776 4388125 ECH