Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00688 ATGTGCAAACGTTTTCCAAGGTCATTTACATATGCAGCAACTCGAATAACAACACAACAGCCTAATTTTAAGGATGCTATAATTGATGCCGCCGCTGATGACCTATTCAATAAAGTTCATGGAATGTCAACATTCCAATACGCTGATAAATATCCAGCACAGAACCACATTTTCAACAAGGCAGTGAACGGTATAAGCACCATGGACATGAAAGCCATTTTACAAGAGTATACAGGATTTGAAGGAATATCAACACTGGTTAATGTAGGTGGAGGAATCGGAGAAATGCTACATATGATAATCTCTAAGTACCCTTCAATAAAGGGCATTAATTTTGATTTGCCCCACGTTGTTGAAAAGGCACCAACATATCCAGGCATAGAACATGTTGGAGGAGACATGTACGTAAGTGTACCCCAGGGTGATGCCATAATTCTAAAGGCTGTGCTGCACAATTGGTCGGATGAAGACTGCTTAAGGCTCTTGAGAAATTGTCACAAGGCACTGCCACAAAATGGAAAGGTGATTGTTGTGGACCTAATAGTGCCAGAAGCATCAGATTCTGATGAATCAAAGATTGTTTCTATCATCGACAATCTCATGTTTGTCATTGGTGGTAAGGAGAGAACAACTAATGAATTTGAGGCTTTATCCAAGCTTTCGGGATTTCCAGGATTTGAAGTTGTTTCTAGAGCATTTGGTGCCTTGGGAGTCATGGAATTTCACAAATAA 732 0.4003 MCKRFPRSFTYAATRITTQQPNFKDAIIDAAADDLFNKVHGMSTFQYADKYPAQNHIFNKAVNGISTMDMKAILQEYTGFEGISTLVNVGGGIGEMLHMIISKYPSIKGINFDLPHVVEKAPTYPGIEHVGGDMYVSVPQGDAIILKAVLHNWSDEDCLRLLRNCHKALPQNGKVIVVDLIVPEASDSDESKIVSIIDNLMFVIGGKERTTNEFEALSKLSGFPGFEVVSRAFGALGVMEFHK 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00688 243 PANTHER O-METHYLTRANSFERASE 20 243 IPR016461 GO:0008168
Cca06g00688 243 Gene3D - 36 73 IPR036388 -
Cca06g00688 243 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 33 238 IPR029063 -
Cca06g00688 243 Gene3D Vaccinia Virus protein VP39 55 231 IPR029063 -
Cca06g00688 243 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 243 IPR016461 GO:0008168
Cca06g00688 243 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 20 243 - -
Cca06g00688 243 Pfam O-methyltransferase domain 23 223 IPR001077 GO:0008171
Cca06g00688 243 CDD AdoMet_MTases 89 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00688 Cca-Chr6 18923277 18928009 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00688 22 234 Monolignol Biosynthesis Gene Families AT5G54160 55.556 5.66e-83 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00688 - - ccaj:109800335 439.113