Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00671 ATGGACGTTTTCGAGTTAGCCAAGAAACTCGCTCTCTCCGACTCCAAACTCGTCGTCCAGAAAGCGGCGGAGCTCCGCCGCCTCTGCGACGTCCAGTTCGATTCCTCCGTCATCGGAGTCGGCGAGGTCGCGAAGTCTCTCATATGCTTGGAAATCGCCGCCACGAGGCTCGGCGTTATCTTCGACCGATCCTCTGCGGTGAGGCTCAGCGGAATGTCCGAAAGAGCCTACATCAGATCCTACAACTCGCTCCACAACGGCCTTGGCGTCAAGATGAAGATAGATGTGAGGGAATTGGCGATTCAGTTCGGCTGCGTTTGCATTATTCCTCTCGTTCGCGACGGTCTCAAACTATATAAGGATCGGTTTGTCTCGTCGTTGCCGGTCTCTCGCCGTGCAAGCGCTGTTTTCACGCGTCCTGTGTTCACCGCCGTTGCTTTTTATTTGTGTGCTAAAAAACACAAGCTGAAAGTAGACAAACTTAAGTTAATCGAGCTCTGCGGTACATCTGAATCTGAGTTTTCTAGTGTTTATGTTACAATGAAGGATTTGTGCCATGATGTTTTTGGGGTGGCAAAGGAAAAGAAGGATCCTAAGGAACTGCAGTCTAATCGAGACTTGCTTGATGTTTTGCCAAGTAAAAGGAAAGCTGAAGAAGGTGGTTCATCCGATGATGGTGCAGAGCTTTCAAGTTATAAAAAAGCCAAAAAAATGGGAAAACGTGATTACGAGAAGTGGAAATCTTCTGTTCTTGCATCCAATCGTCAAAAAAAGACGAAAGCGCCTTGCAAGCGAACTAAACAGACTCGTCTCAACTTTATCAAGGAATCTCCCGATACTAAGGAGTTGGAGGCCATGTGA 861 0.4797 MDVFELAKKLALSDSKLVVQKAAELRRLCDVQFDSSVIGVGEVAKSLICLEIAATRLGVIFDRSSAVRLSGMSERAYIRSYNSLHNGLGVKMKIDVRELAIQFGCVCIIPLVRDGLKLYKDRFVSSLPVSRRASAVFTRPVFTAVAFYLCAKKHKLKVDKLKLIELCGTSESEFSSVYVTMKDLCHDVFGVAKEKKDPKELQSNRDLLDVLPSKRKAEEGGSSDDGAELSSYKKAKKMGKRDYEKWKSSVLASNRQKKTKAPCKRTKQTRLNFIKESPDTKELEAM 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00671 286 CDD Orc6_mid 93 188 - -
Cca06g00671 286 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 283 IPR020529 GO:0005664|GO:0006260
Cca06g00671 286 PANTHER BNAC05G50940D PROTEIN 1 283 - -
Cca06g00671 286 MobiDBLite consensus disorder prediction 269 286 - -
Cca06g00671 286 MobiDBLite consensus disorder prediction 212 248 - -
Cca06g00671 286 MobiDBLite consensus disorder prediction 212 286 - -
Cca06g00671 286 Gene3D - 92 188 - -
Cca06g00671 286 Pfam Origin recognition complex subunit 6 (ORC6) 6 91 IPR008721 GO:0003677|GO:0005664|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00671 1 284 Core DNA Replication Machinery Family AT1G26840 61.972 1.06e-123 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00671 K02608 - gmx:100777539 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00671 06 18591322 18594923 Cca06g00671 06 18591322 18594923 ECH